RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 CRIP3Q6Q6R5 217 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 RTN4RL2Q86UN3 420 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 OR11H6Q8NGC7 330 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 SGMS2Q8NHU3 365 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 NDNFQ8TB73 568 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 NEK7Q8TDX7 302 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 CORO2AQ92828 525 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 MALSU1Q96EH3 234 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 MRPS24Q96EL2 167 aaKnown RBP12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 DERL3Q96Q80 235 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 ZNF747Q9BV97 191 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 TMED9Q9BVK6 235 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 CLEC7AQ9BXN2 247 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 MEGF9Q9H1U4 602 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 TMEM133Q9H2Q1 129 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 SPACA1Q9HBV2 294 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 MRPS28Q9Y2Q9 187 aaKnown RBP12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 MMP24Q9Y5R2 645 aa12.84□□□□□ -0.35
TSPAN4-201ENST00000346501 MEIKINA0A087WXM9 373 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 H3BUX3 64 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 TOR1AO14656 332 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 CDK2P24941 298 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 RANBP1P43487 201 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 RBM11P57052 281 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 TRAM1Q15629 374 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 PIGYQ3MUY2 71 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 NHLRC3Q5JS37 347 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 ATAD3CQ5T2N8 411 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 MINOS1Q5TGZ0 78 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 GLT8D1Q68CQ7 371 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 ZNF626Q68DY1 528 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 HEPN1Q6WQI6 88 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 Q8NFD4 153 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 ZNF596Q8TC21 504 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 MUL1Q969V5 352 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 CREB3L1Q96BA8 519 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 ORAI1Q96D31 301 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 NCOR1P1Q9H4R4 102 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 C1RLQ9NZP8 487 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 PITPNC1Q9UKF7 332 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 MINOS1-NBL1R4GNA1 71 aa12.83□□□□□ -0.36
TSPAN4-201ENST00000346501 TRAV8-7A0A075B6U6 113 aa12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 CLPSL1A2RUU4 121 aa12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 MDKP21741 143 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 PSMA1P25786 263 aaKnown RBP12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 HTR1DP28221 377 aa12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 CEACAM3P40198 252 aa12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 GLP1RP43220 463 aa12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 PRRX1P54821 245 aa12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 RBM39Q14498 530 aaKnown RBP12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 FAM189A2Q15884 450 aa12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 TAF9Q16594 264 aa12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 GLIPR1L1Q6UWM5 242 aa12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 LIAT1Q6ZQX7 453 aa12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 PRSS48Q7RTY5 328 aa12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 OR5M11Q96RB7 305 aa12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 UQCC2Q9BRT2 126 aa12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 DPCDQ9BVM2 203 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 DUSP21Q9H596 190 aa12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 ISYNA1Q9NPH2 558 aa12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 GHRLQ9UBU3 117 aa12.82□□□□□ -0.36
TSPAN4-201ENST00000346501 IGHV2-26A0A0B4J1V2 119 aa12.81□□□□□ -0.36
TSPAN4-201ENST00000346501 CRHBPP24387 322 aa12.81□□□□□ -0.36
TSPAN4-201ENST00000346501 SSX2Q16385 188 aa12.81□□□□□ -0.36
TSPAN4-201ENST00000346501 HSD17B12Q53GQ0 312 aa12.81□□□□□ -0.36
TSPAN4-201ENST00000346501 OLFML2AQ68BL7 652 aa12.81□□□□□ -0.36
TSPAN4-201ENST00000346501 TCF23Q7RTU1 214 aa12.81□□□□□ -0.36
TSPAN4-201ENST00000346501 CEACAM19Q7Z692 300 aa12.81□□□□□ -0.36
TSPAN4-201ENST00000346501 ABHD12Q8N2K0 398 aa12.81□□□□□ -0.36
TSPAN4-201ENST00000346501 PHYHIPQ92561 330 aa12.81□□□□□ -0.36
TSPAN4-201ENST00000346501 NKX3-1Q99801 234 aaPredicted RBP12.81□□□□□ -0.36
TSPAN4-201ENST00000346501 CST11Q9H112 138 aa12.81□□□□□ -0.36
TSPAN4-201ENST00000346501 IFT22Q9H7X7 185 aa12.81□□□□□ -0.36
TSPAN4-201ENST00000346501 RAB9BQ9NP90 201 aa12.81□□□□□ -0.36
TSPAN4-201ENST00000346501 KIF25Q9UIL4 384 aa12.81□□□□□ -0.36
TSPAN4-201ENST00000346501 TRAV24A0A0B4J272 114 aa12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 FAM90A8PA6NJQ4 464 aa12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 ODF3BA8MYP8 253 aa12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 MCRIP1C9JLW8 97 aa12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 GEMIN2O14893 280 aaKnown RBP12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 CRTAPO75718 401 aaPredicted RBP12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 ARL6IP5O75915 188 aa12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 UBBP0CG47 229 aa12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 GZMHP20718 246 aa12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 NFYBP25208 207 aa12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 IRF3Q14653 427 aa12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 LY6EQ16553 131 aa12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 PRAMEF5Q5TYX0 476 aa12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 LIPKQ5VXJ0 399 aa12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 LHFPL4Q7Z7J7 247 aa12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 SUMF2Q8NBJ7 301 aa12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 COQ2Q96H96 371 aa12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 LSM2Q9Y333 95 aaKnown RBP12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 RNF114Q9Y508 228 aa12.8□□□□□ -0.36
TSPAN4-201ENST00000346501 KBTBD11-OT1A0A1B0GTJ5 212 aa12.79□□□□□ -0.36
TSPAN4-201ENST00000346501 TMEM30CPA0ZSE6 113 aa12.79□□□□□ -0.36
TSPAN4-201ENST00000346501 F2RL2O00254 374 aa12.79□□□□□ -0.36
TSPAN4-201ENST00000346501 BRS3P32247 399 aa12.79□□□□□ -0.36
TSPAN4-201ENST00000346501 PAX5Q02548 391 aa12.79□□□□□ -0.36
TSPAN4-201ENST00000346501 MLLT11Q13015 90 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms