RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 KIR2DS2P43631 304 aa15.9■□□□□ 0.14
SMC4-201ENST00000344722 CAMPP49913 170 aa15.9■□□□□ 0.14
SMC4-201ENST00000344722 MRGPRX1Q96LB2 322 aa15.9■□□□□ 0.14
SMC4-201ENST00000344722 CD82P27701 267 aa15.9■□□□□ 0.14
SMC4-201ENST00000344722 RPL13AP40429 203 aaKnown RBP15.9■□□□□ 0.14
SMC4-201ENST00000344722 P2RY4P51582 365 aa15.9■□□□□ 0.14
SMC4-201ENST00000344722 TRAT1Q6PIZ9 186 aa15.9■□□□□ 0.14
SMC4-201ENST00000344722 GLRX5Q86SX6 157 aa15.9■□□□□ 0.14
SMC4-201ENST00000344722 TMEM251Q8N6I4 163 aa15.9■□□□□ 0.14
SMC4-201ENST00000344722 TMEM11P17152 192 aa15.9■□□□□ 0.14
SMC4-201ENST00000344722 LYRM7Q5U5X0 104 aa15.9■□□□□ 0.14
SMC4-201ENST00000344722 LINC00696Q6ZRV3 163 aa15.9■□□□□ 0.14
SMC4-201ENST00000344722 OR10X1Q8NGY0 326 aa15.9■□□□□ 0.14
SMC4-201ENST00000344722 RNF2Q99496 336 aa15.9■□□□□ 0.14
SMC4-201ENST00000344722 HSPB9Q9BQS6 159 aa15.9■□□□□ 0.14
SMC4-201ENST00000344722 OR2D2Q9H210 308 aa15.9■□□□□ 0.14
SMC4-201ENST00000344722 CXCL10P02778 98 aa15.9■□□□□ 0.14
SMC4-201ENST00000344722 GLULP15104 373 aa15.9■□□□□ 0.14
SMC4-201ENST00000344722 H0YL77 283 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 FAM157BP0CG42 384 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 GLIPR1P48060 266 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 C1QL3Q5VWW1 255 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 DTD1Q8TEA8 209 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 TP53RKQ96S44 253 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 LPAR5Q9H1C0 372 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 CCL28Q9NRJ3 127 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 TECRQ9NZ01 308 aaKnown RBP15.89■□□□□ 0.13
SMC4-201ENST00000344722 TUBD1Q9UJT1 453 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 FCGR3BO75015 233 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 C1QL1O75973 258 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 HOXC4P09017 264 aaPredicted RBP15.89■□□□□ 0.13
SMC4-201ENST00000344722 ZNF32P17041 273 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 GALNSP34059 522 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 WFDC6Q9BQY6 131 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 MYOZ1Q9NP98 299 aaPredicted RBP15.89■□□□□ 0.13
SMC4-201ENST00000344722 SLC2A8Q9NY64 477 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 UQCR10Q9UDW1 63 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 CACNA1CQ13936 2221 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 ST8SIA5O15466 376 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 APCSP02743 223 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 SUCLG1P53597 346 aaKnown RBP15.89■□□□□ 0.13
SMC4-201ENST00000344722 RPS23P62266 143 aaKnown RBP15.89■□□□□ 0.13
SMC4-201ENST00000344722 C1orf100Q5SVJ3 147 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 ZNF343Q6P1L6 599 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 FER1L6-AS2Q96M78 137 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 BARX1Q9HBU1 254 aaPredicted RBP15.89■□□□□ 0.13
SMC4-201ENST00000344722 SHISA3A0PJX4 238 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 METTL12A8MUP2 240 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 EFNB1P98172 346 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 ABHD14BQ96IU4 210 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 HES4Q9HCC6 221 aa15.89■□□□□ 0.13
SMC4-201ENST00000344722 FUT5Q11128 374 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 SPATA45Q537H7 98 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 SGMS2Q8NHU3 365 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 CENPVL1A0A0U1RR11 272 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 TCL1AP56279 114 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 GPX7Q96SL4 187 aaPredicted RBP15.88■□□□□ 0.13
SMC4-201ENST00000344722 P4HTMQ9NXG6 502 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 PIPOXQ9P0Z9 390 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 UPK3AO75631 287 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 ANKRD55Q3KP44 614 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 LEMD1Q68G75 181 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 TMEM252Q8N6L7 170 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 CPEB3Q8NE35 698 aaKnown RBP15.88■□□□□ 0.13
SMC4-201ENST00000344722 ATG101Q9BSB4 218 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 ZNF355PQ9NSJ1 428 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 DOCK1Q14185 1865 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 CXorf1O96002 111 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 BCL3P20749 454 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 GNB1P62873 340 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 OR4A47Q6IF82 309 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 BPIFA4PQ86YQ2 179 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 UBALD1Q8TB05 177 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 GMPPAQ96IJ6 420 aaPredicted RBP15.88■□□□□ 0.13
SMC4-201ENST00000344722 PCGF1Q9BSM1 259 aa15.88■□□□□ 0.13
SMC4-201ENST00000344722 CISD1Q9NZ45 108 aaKnown RBP15.88■□□□□ 0.13
SMC4-201ENST00000344722 SPTY2D1-AS1A0A0U1RR47 76 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 GAMTQ14353 236 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 TMEM196Q5HYL7 178 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 PTPMT1Q8WUK0 201 aaPredicted RBP15.87■□□□□ 0.13
SMC4-201ENST00000344722 CHST5Q9GZS9 411 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 CBLN4Q9NTU7 201 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 CYR61O00622 381 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 SRSF10O75494 262 aaKnown RBP15.87■□□□□ 0.13
SMC4-201ENST00000344722 RND3P61587 244 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 DMWDQ09019 674 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 PLPPR5Q32ZL2 321 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 PARD6GQ9BYG4 376 aaPredicted RBP15.87■□□□□ 0.13
SMC4-201ENST00000344722 SLC7A10Q9NS82 523 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 SCGB1C2P0DMR2 95 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 RUNX1Q01196 453 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 TMEM183AQ8IXX5 376 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 OR1L4Q8NGR5 311 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 NRTNQ99748 197 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 RARRES2Q99969 163 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 FOXQ1Q9C009 403 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 NGBQ9NPG2 151 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 LOC102724200A0A096LPH7 203 aaPredicted RBP15.87■□□□□ 0.13
SMC4-201ENST00000344722 GLB1P16278 677 aa15.87■□□□□ 0.13
SMC4-201ENST00000344722 PRSS53Q2L4Q9 553 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms