RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 CA11O75493 328 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 GPANK1O95872 356 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 PRSS56P0CW18 603 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 TBC1D28Q2M2D7 210 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 OR10J3Q5JRS4 329 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 MEX3DQ86XN8 651 aaKnown RBP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 VSTM2AQ8TAG5 236 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM37Q8WXS4 190 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 PRSS1P07477 247 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 TIA1P31483 386 aaKnown RBP eCLIP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 HTR6P50406 440 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 OR1C1Q15619 314 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 SPANXN4Q5MJ08 99 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 LDLRAD1Q5T700 205 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 MRPL55Q7Z7F7 128 aaKnown RBP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 RNF125Q96EQ8 232 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 TIAF1O95411 115 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 SPINK8P0C7L1 97 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 GPR183P32249 361 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 SYPL2Q5VXT5 272 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 GLCCI1Q86VQ1 547 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 VKORC1L1Q8N0U8 176 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 NPEPL1Q8NDH3 523 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 NUP37Q8NFH4 326 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 OR2Z1Q8NG97 314 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 MRPL30Q8TCC3 161 aaKnown RBP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 FAM110AQ9BQ89 295 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 TRAV8-2A0A0B4J237 113 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 ALOX12BO75342 701 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 ZXDAP98168 799 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 MRPL23Q16540 153 aaKnown RBP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 OR10V1Q8NGI7 309 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 SEC22AQ96IW7 307 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 IFI27L2Q9H2X8 130 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 A0A1W2PQM1 296 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 RER1O15258 196 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 OR1F12Q8NHA8 337 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 CST9LQ9H4G1 147 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 CDCP1Q9H5V8 836 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 YPEL1O60688 119 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 CRYBB3P26998 211 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 SNRPNP63162 240 aaKnown RBP3.35□□□□□ -1.87
SYNE2-202ENST00000344113 SIGLEC14Q08ET2 396 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 WDR54Q9H977 334 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 VDAC3Q9Y277 283 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 TRACP01848 142 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 ZNF714Q96N38 554 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 RHBDD3Q9Y3P4 386 aa3.35□□□□□ -1.87
SYNE2-202ENST00000344113 PLPP1O14494 284 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 FOXH1O75593 365 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 HSD52Q0P140 79 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 SYT14P1Q58G82 188 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 HES2Q9Y543 173 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 RAB29O14966 203 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 LGALS1P09382 135 aaKnown RBP3.34□□□□□ -1.87
SYNE2-202ENST00000344113 RBM11P57052 281 aaKnown RBP3.34□□□□□ -1.87
SYNE2-202ENST00000344113 METRNLQ641Q3 311 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 SYT9Q86SS6 491 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 XCR1P46094 333 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 Q7L0L9 218 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 ARIH2OSQ8N7S6 290 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 OR1L1Q8NH94 360 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 AICDAQ9GZX7 198 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 MS4A5Q9H3V2 200 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 PREX1Q8TCU6 1659 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 DRD3P35462 400 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 FAM57BQ71RH2 274 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 GPR78Q96P69 363 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 NPIPB15A6NHN6 443 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-202ENST00000344113 CTSVO60911 334 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 CST7O76096 145 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 EGR3Q06889 387 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 PRRT2Q7Z6L0 340 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-202ENST00000344113 GLIS3Q8NEA6 775 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 MRGPRX3Q96LB0 322 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 RCL1Q9Y2P8 373 aaKnown RBP3.34□□□□□ -1.87
SYNE2-202ENST00000344113 TMEM56-RWDD3S4R434 201 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 DSPPQ9NZW4 1301 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 CD68P34810 354 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-202ENST00000344113 EXOSC7Q15024 291 aaKnown RBP3.34□□□□□ -1.87
SYNE2-202ENST00000344113 GPR146Q96CH1 333 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 TIMD4Q96H15 378 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 PYGO2Q9BRQ0 406 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 NTNG1Q9Y2I2 539 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 Q56UQ5 140 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 PTOV1Q86YD1 416 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 YAF2Q8IY57 180 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 MKXQ8IYA7 352 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 C5orf17Q8NAS9 161 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 HINT3Q9NQE9 182 aaKnown RBP3.34□□□□□ -1.87
SYNE2-202ENST00000344113 FBLN5Q9UBX5 448 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 KIAA0556O60303 1618 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 YJEFN3A6XGL0 299 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 IGHG1P01857 330 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 LCATP04180 440 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 STC1P52823 247 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 SPRYD7Q5W111 196 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 C6orf15Q6UXA7 325 aaPredicted RBP3.34□□□□□ -1.87
SYNE2-202ENST00000344113 OR11H7Q8NGC8 314 aa3.34□□□□□ -1.87
SYNE2-202ENST00000344113 KLHDC2Q9Y2U9 406 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms