RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 IGKV1D-13A0A0B4J2D9 117 aa12.74□□□□□ -0.37
VIPAS39-202ENST00000343765 NXPH3O95157 252 aa12.74□□□□□ -0.37
VIPAS39-202ENST00000343765 IGKV1-13P0DP09 117 aa12.74□□□□□ -0.37
VIPAS39-202ENST00000343765 UCP3P55916 312 aa12.74□□□□□ -0.37
VIPAS39-202ENST00000343765 ZNF818PQ6ZRF7 136 aa12.74□□□□□ -0.37
VIPAS39-202ENST00000343765 Q6ZRG5 221 aa12.74□□□□□ -0.37
VIPAS39-202ENST00000343765 WFDC1Q9HC57 220 aa12.74□□□□□ -0.37
VIPAS39-202ENST00000343765 UQCC1Q9NVA1 299 aa12.74□□□□□ -0.37
VIPAS39-202ENST00000343765 NKX2-6A6NCS4 301 aa12.74□□□□□ -0.37
VIPAS39-202ENST00000343765 ATP6V1G2-DDX39BF2Z307 99 aa12.74□□□□□ -0.37
VIPAS39-202ENST00000343765 IL34Q6ZMJ4 242 aa12.74□□□□□ -0.37
VIPAS39-202ENST00000343765 LDLRAD3Q86YD5 345 aa12.74□□□□□ -0.37
VIPAS39-202ENST00000343765 CBLN2Q8IUK8 224 aa12.74□□□□□ -0.37
VIPAS39-202ENST00000343765 GAPTQ8N292 157 aa12.74□□□□□ -0.37
VIPAS39-202ENST00000343765 LRTM2Q8N967 370 aa12.74□□□□□ -0.37
VIPAS39-202ENST00000343765 PLEKHA2Q9HB19 425 aa12.74□□□□□ -0.37
VIPAS39-202ENST00000343765 LHX6Q9UPM6 363 aa12.74□□□□□ -0.37
VIPAS39-202ENST00000343765 RP1L1Q8IWN7 2480 aaPredicted RBP12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 ZFHX2Q9C0A1 2572 aaPredicted RBP12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 TRGV5A0A0B4J1U4 118 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 SLC22A20A6NK97 555 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 RHBDL1O75783 438 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 NAPSAO96009 420 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 SULT1A2P50226 295 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 NHLH2Q02577 135 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 ZNF766Q5HY98 468 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 SUMF2Q8NBJ7 301 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 Q8NFD4 153 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 OR5A2Q8NGI9 324 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 OR1K1Q8NGR3 316 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 OR5P3Q8WZ94 311 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 SAT2Q96F10 170 aaPredicted RBP12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 MED19A0JLT2 244 aaPredicted RBP12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 ST8SIA3O43173 380 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 SS18L1O75177 396 aaPredicted RBP12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 CELA3BP08861 270 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 SWI5Q1ZZU3 235 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 C20orf204Q6ZNR8 217 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 MYPOPQ86VE0 399 aaPredicted RBP12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 ZNF695Q8IW36 515 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 GCNT2Q8N0V5 402 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 ZFP62Q8NB50 900 aaPredicted RBP12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 WDYHV1Q96HA8 205 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 TMEM9BQ9NQ34 198 aa12.73□□□□□ -0.37
VIPAS39-202ENST00000343765 TRAV39A0A0B4J263 110 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 IGKV1-6A0A0C4DH72 117 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 FAM90A10PA6NDY2 464 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 FAM90A18PA6NE21 464 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 FAM90A16PA6NEW6 464 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 FAM90A20PA6NIJ5 464 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 FAM90A8PA6NJQ4 464 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 FAM90A7PA6NKC0 464 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 FAM90A22PA8MWA6 464 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 FAM90A12PA8MX19 464 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 FAM90A5PA8MXJ8 464 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 FAM90A23PA8MXZ1 464 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 TOR1AO14656 332 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 GLAP06280 429 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 OR8U9P0C7N5 309 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 FAM90A15PP0C7V4 464 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 FAM90A13PP0C7W8 464 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 FAM90A14PP0C7W9 464 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 FAM90A24PP0C7X0 464 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 CAV2P51636 162 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 SAXO1Q8IYX7 474 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 OR8U1Q8NH10 309 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 LOXL4Q96JB6 756 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 USB1Q9BQ65 265 aaKnown RBP12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 MAGT1Q9H0U3 335 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 CCL28Q9NRJ3 127 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 GPR137BO60478 399 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 GAPDHP04406 335 aaKnown RBP12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 CD80P33681 288 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 FHITP49789 147 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 SRSF6Q13247 344 aaKnown RBP12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 FBXW9Q5XUX1 488 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 HSD17B11Q8NBQ5 300 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 SH3BGRL3Q9H299 93 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 RNF122Q9H9V4 155 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 RCC2Q9P258 522 aaKnown RBP12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 TMED3Q9Y3Q3 217 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 AKAP13Q12802 2813 aa12.72□□□□□ -0.37
VIPAS39-202ENST00000343765 C1QL1O75973 258 aa12.71□□□□□ -0.37
VIPAS39-202ENST00000343765 PMELP40967 661 aa12.71□□□□□ -0.37
VIPAS39-202ENST00000343765 NPBWR1P48145 328 aa12.71□□□□□ -0.37
VIPAS39-202ENST00000343765 ZNF616Q08AN1 781 aa12.71□□□□□ -0.37
VIPAS39-202ENST00000343765 MPV17LQ2QL34 196 aa12.71□□□□□ -0.37
VIPAS39-202ENST00000343765 CLRN3Q8NCR9 226 aa12.71□□□□□ -0.37
VIPAS39-202ENST00000343765 NRIP2Q9BQI9 281 aa12.71□□□□□ -0.37
VIPAS39-202ENST00000343765 TMEM222Q9H0R3 208 aa12.71□□□□□ -0.37
VIPAS39-202ENST00000343765 OTOGLQ3ZCN5 2332 aa12.71□□□□□ -0.37
VIPAS39-202ENST00000343765 ATMQ13315 3056 aa12.71□□□□□ -0.37
VIPAS39-202ENST00000343765 ARHGAP21Q5T5U3 1957 aa12.71□□□□□ -0.37
VIPAS39-202ENST00000343765 CEP250Q9BV73 2442 aa12.71□□□□□ -0.37
VIPAS39-202ENST00000343765 TRDCB7Z8K6 153 aa12.71□□□□□ -0.38
VIPAS39-202ENST00000343765 ZNF44P15621 663 aa12.71□□□□□ -0.38
VIPAS39-202ENST00000343765 OMGP23515 440 aa12.71□□□□□ -0.38
VIPAS39-202ENST00000343765 POLR2GP62487 172 aaKnown RBP eCLIP12.71□□□□□ -0.38
VIPAS39-202ENST00000343765 GNG3P63215 75 aa12.71□□□□□ -0.38
VIPAS39-202ENST00000343765 P4HA3Q7Z4N8 544 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms