RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 TMEM69Q5SWH9 247 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 HLA-DQA1Q5Y7H0 255 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 FBXW12Q6X9E4 464 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 CDRT4Q8N9R6 151 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 OR6T1Q8NGN1 323 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 OR13C5Q8NGS8 318 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 OR13C2Q8NGS9 318 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 S100A16Q96FQ6 103 aaKnown RBP6.27□□□□□ -1.41
ZNF540-202ENST00000343599 Q96MF0 132 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 NKX3-1Q99801 234 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-202ENST00000343599 C16orf95Q9H693 158 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 SLC2A9Q9NRM0 540 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 TGIF2-C20orf24A0A0A6YYL0 155 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 PPP5D1E7EU14 171 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 NDUFB8O95169 186 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 SYNGR4O95473 234 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 LCATP04180 440 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 LMO1P25800 156 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 LGALS4P56470 323 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 HILS1P60008 231 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 ESPL1Q14674 2120 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 NOXRED1Q6NXP6 359 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 ZNF474Q6S9Z5 364 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-202ENST00000343599 ZNF705AQ6ZN79 300 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-202ENST00000343599 SLC25A26Q70HW3 274 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 ZNF100Q8IYN0 542 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 OR1P1Q8NH06 330 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 OR5AK2Q8NH90 309 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 CASTOR1Q8WTX7 329 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 GHSRQ92847 366 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 HAVCR1Q96D42 359 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 SMIM12Q96EX1 92 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 PGAM5Q96HS1 289 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 SLC35E1Q96K37 410 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 SMDT1Q9H4I9 107 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 ZNF430Q9H8G1 570 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-202ENST00000343599 NBEAQ8NFP9 2946 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 SHISA9B4DS77 424 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 ACTL6BO94805 426 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 AKAIN1P0CW23 69 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 PSMB5P28074 263 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 TAS2R20P59543 309 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 FOXL1Q12952 345 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 DMKNQ6E0U4 476 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-202ENST00000343599 ARL9Q6T311 187 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 BHLHA15Q7RTS1 189 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-202ENST00000343599 GBGT1Q8N5D6 347 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 TMEM56Q96MV1 263 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 IL17FQ96PD4 163 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 CITED2Q99967 270 aaPredicted RBP6.27□□□□□ -1.41
ZNF540-202ENST00000343599 PLA2G12AQ9BZM1 189 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 CDH20Q9HBT6 801 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 INPP5EQ9NRR6 644 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 TMEM56-RWDD3S4R434 201 aa6.27□□□□□ -1.41
ZNF540-202ENST00000343599 ARL6IP5O75915 188 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 NUDT14O95848 222 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 KNG1P01042 644 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 USF1P22415 310 aaPredicted RBP6.26□□□□□ -1.41
ZNF540-202ENST00000343599 GDF1P27539 372 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 CHATP28329 748 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 TMEM33P57088 247 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 H3F3AP84243 136 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 ZNF616Q08AN1 781 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 DHRS2Q13268 280 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 ZNF343Q6P1L6 599 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 H1FOOQ8IZA3 346 aaPredicted RBP6.26□□□□□ -1.41
ZNF540-202ENST00000343599 AQP10Q96PS8 301 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 PHB2Q99623 299 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 SLC25A21Q9BQT8 299 aaPredicted RBP6.26□□□□□ -1.41
ZNF540-202ENST00000343599 RNF126Q9BV68 326 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 MRPL13Q9BYD1 178 aaKnown RBP6.26□□□□□ -1.41
ZNF540-202ENST00000343599 PLA2G2EQ9NZK7 142 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 IL19Q9UHD0 177 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 PTPN13Q12923 2485 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 C22orf46C9J442 243 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 RAMP1O60894 148 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 GPANK1O95872 356 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 CELA2AP08217 269 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 CDK2P24941 298 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 CEBPGP53567 150 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 BTN3A2P78410 334 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 SSBP1Q04837 148 aaKnown RBP6.26□□□□□ -1.41
ZNF540-202ENST00000343599 DPY19L2P2Q6ZN68 376 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 Q6ZRG5 221 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 ADCK2Q7Z695 626 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 ZSCAN4Q8NAM6 433 aaPredicted RBP6.26□□□□□ -1.41
ZNF540-202ENST00000343599 NOXO1Q8NFA2 376 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 DCUN1D4Q92564 292 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 C16orf58Q96GQ5 468 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 SEC22AQ96IW7 307 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 SNX22Q96L94 193 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 SRSF8Q9BRL6 282 aaKnown RBP6.26□□□□□ -1.41
ZNF540-202ENST00000343599 SLC17A5Q9NRA2 495 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 HSPB7Q9UBY9 170 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 ANGPT4Q9Y264 503 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 PPIAL4AQ9Y536 164 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 SLC25A15Q9Y619 301 aa6.26□□□□□ -1.41
ZNF540-202ENST00000343599 IGHV2-70DA0A0C4DH43 119 aa6.25□□□□□ -1.41
ZNF540-202ENST00000343599 SERTM2A0A1B0GWG4 89 aa6.25□□□□□ -1.41
ZNF540-202ENST00000343599 IFITM5A6NNB3 132 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms