RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 LPCAT3Q6P1A2 487 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 C15orf54Q8N8G6 183 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 ARL11Q969Q4 196 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 MRPL37Q9BZE1 423 aaKnown RBP11.28□□□□□ -0.6
COL18A1-201ENST00000342220 ACKR4Q9NPB9 350 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 ZNF107Q9UII5 783 aaPredicted RBP11.28□□□□□ -0.6
COL18A1-201ENST00000342220 TRGV8A0A0C4DH27 118 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 F5H0A9 414 aaPredicted RBP11.28□□□□□ -0.6
COL18A1-201ENST00000342220 TSTD3H0UI37 97 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 H7C1Q1 480 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 SOX15O60248 233 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 ERCC1P07992 297 aaPredicted RBP11.28□□□□□ -0.6
COL18A1-201ENST00000342220 SLC25A4P12235 298 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 ZNF83P51522 516 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 HOXA4Q00056 320 aaPredicted RBP11.28□□□□□ -0.6
COL18A1-201ENST00000342220 PCK2Q16822 640 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 C10orf128Q5T292 105 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 OR10R2Q8NGX6 335 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 DYRK2Q92630 601 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 PTX4Q96A99 478 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 DNAJB11Q9UBS4 358 aa11.28□□□□□ -0.6
COL18A1-201ENST00000342220 C1QTNF9BB2RNN3 333 aa11.27□□□□□ -0.6
COL18A1-201ENST00000342220 C1QTNF9P0C862 333 aa11.27□□□□□ -0.6
COL18A1-201ENST00000342220 GPM6AP51674 278 aa11.27□□□□□ -0.6
COL18A1-201ENST00000342220 LY6DQ14210 128 aa11.27□□□□□ -0.6
COL18A1-201ENST00000342220 ZNF345Q14585 488 aa11.27□□□□□ -0.6
COL18A1-201ENST00000342220 ACOT7LQ6ZUV0 252 aa11.27□□□□□ -0.6
COL18A1-201ENST00000342220 RBMXL3Q8N7X1 1067 aaKnown RBP11.27□□□□□ -0.6
COL18A1-201ENST00000342220 UBAC2Q8NBM4 344 aa11.27□□□□□ -0.6
COL18A1-201ENST00000342220 FOXRED1Q96CU9 486 aaPredicted RBP11.27□□□□□ -0.6
COL18A1-201ENST00000342220 HIST1H2AAQ96QV6 131 aa11.27□□□□□ -0.6
COL18A1-201ENST00000342220 SEC11CQ9BY50 192 aa11.27□□□□□ -0.6
COL18A1-201ENST00000342220 SLC2A8Q9NY64 477 aa11.27□□□□□ -0.6
COL18A1-201ENST00000342220 SNRPCP09234 159 aaKnown RBP11.27□□□□□ -0.61
COL18A1-201ENST00000342220 MALLQ13021 153 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 FAM214BQ7L5A3 538 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 OR10D4PQ8NGN7 298 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 MITD1Q8WV92 249 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 PHB2Q99623 299 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 C2orf88Q9BSF0 95 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 TMEM59Q9BXS4 323 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 FN3KRPQ9HA64 309 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 KIAA1549Q9HCM3 1950 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 A0A1W2PPH5 198 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 SOCS1O15524 211 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 DHRS3O75911 302 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 NRASP01111 189 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 GRPP07492 148 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 RCC1P18754 421 aaPredicted RBP11.27□□□□□ -0.61
COL18A1-201ENST00000342220 CA6P23280 308 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 QRFPP83859 136 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 UBALD1Q8TB05 177 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 ZNF488Q96MN9 340 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 ZDHHC11Q9H8X9 412 aa11.27□□□□□ -0.61
COL18A1-201ENST00000342220 C13orf42A0A1B0GVH6 325 aa11.26□□□□□ -0.61
COL18A1-201ENST00000342220 DNPH1O43598 174 aa11.26□□□□□ -0.61
COL18A1-201ENST00000342220 OR7C1O76099 320 aaPredicted RBP11.26□□□□□ -0.61
COL18A1-201ENST00000342220 BLVRBP30043 206 aaPredicted RBP11.26□□□□□ -0.61
COL18A1-201ENST00000342220 PTGER4P35408 488 aa11.26□□□□□ -0.61
COL18A1-201ENST00000342220 PDZD11Q5EBL8 140 aa11.26□□□□□ -0.61
COL18A1-201ENST00000342220 SLC25A26Q70HW3 274 aa11.26□□□□□ -0.61
COL18A1-201ENST00000342220 SLC30A7Q8NEW0 376 aa11.26□□□□□ -0.61
COL18A1-201ENST00000342220 MT-ND4LP03901 98 aa11.26□□□□□ -0.61
COL18A1-201ENST00000342220 SNRNP70P08621 437 aaKnown RBP11.26□□□□□ -0.61
COL18A1-201ENST00000342220 CST2P09228 141 aa11.26□□□□□ -0.61
COL18A1-201ENST00000342220 DAOP14920 347 aa11.26□□□□□ -0.61
COL18A1-201ENST00000342220 MYPOPQ86VE0 399 aaPredicted RBP11.26□□□□□ -0.61
COL18A1-201ENST00000342220 ZDHHC22Q8N966 263 aa11.26□□□□□ -0.61
COL18A1-201ENST00000342220 MARCH1Q8TCQ1 289 aa11.26□□□□□ -0.61
COL18A1-201ENST00000342220 ZNF581Q9P0T4 197 aa11.26□□□□□ -0.61
COL18A1-201ENST00000342220 PROCRQ9UNN8 238 aa11.26□□□□□ -0.61
COL18A1-201ENST00000342220 SLC7A11Q9UPY5 501 aa11.26□□□□□ -0.61
COL18A1-201ENST00000342220 IGKV1-9A0A0C4DH69 117 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 C5orf51A6NDU8 294 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 OR6C6A6NF89 314 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 SYNGR3O43761 229 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 IL18BPO95998 194 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 IFNA6P05013 189 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 GLI4P10075 376 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 OPRM1P35372 400 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 OR10AD1Q8NGE0 317 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 HRH4Q9H3N8 390 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 M0R1B8 84 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 SDCBPO00560 298 aaPredicted RBP11.25□□□□□ -0.61
COL18A1-201ENST00000342220 AGPAT2O15120 278 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 ATXN7O15265 892 aaPredicted RBP11.25□□□□□ -0.61
COL18A1-201ENST00000342220 BPNT1O95861 308 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 PAX6P26367 422 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 GSK3AP49840 483 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 NDUFA6P56556 154 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 DRAM2Q6UX65 266 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 PRR18Q8N4B5 295 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 INO80EQ8NBZ0 244 aaPredicted RBP11.25□□□□□ -0.61
COL18A1-201ENST00000342220 OR4A4PQ8NGN8 299 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 OR2J1Q9GZK6 312 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 A0A0A6YYD4 124 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 MARCH11A6NNE9 402 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 LILRA1O75019 489 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 HLA-GP17693 338 aa11.25□□□□□ -0.61
COL18A1-201ENST00000342220 PI3P19957 117 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms