RNA–Protein interactions for RNA: ENST00000341594.9

SYNE1-201, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNE1, Length 26,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-201ENST00000341594 C1orf43Q9BWL3 253 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 HS3ST4Q9Y661 456 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 CENPVL1A0A0U1RR11 272 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 F8WDY8 70 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 CD14P08571 375 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 WNT3P56703 355 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 KLF3P57682 345 aaPredicted RBP3.14□□□□□ -1.91
SYNE1-201ENST00000341594 ERVFC1-1P60608 527 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 ASPHD2Q6ICH7 369 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 ZNF562Q6V9R5 426 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 CYHR1Q6ZMK1 362 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 TRBV24-1A0A075B6N3 115 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 XKRYO14609 159 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 TACR2P21452 398 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 EMDP50402 254 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 LINC00205P59089 165 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 MESTQ5EB52 335 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 Q6ZSR9 355 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 MEPCEQ7L2J0 689 aaKnown RBP3.14□□□□□ -1.91
SYNE1-201ENST00000341594 OR52I1Q8NGK6 324 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 C2orf50Q96LR7 162 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 KATNBL1Q9H079 304 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 POLQO75417 2590 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.14□□□□□ -1.91
SYNE1-201ENST00000341594 SLC38A8A6NNN8 435 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 KIR3DL2P43630 455 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 GDF7Q7Z4P5 450 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 RAB1BQ9H0U4 201 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 MAP1LC3B2A6NCE7 125 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 FAM78AQ5JUQ0 283 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 NPSR1Q6W5P4 371 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 ASB10Q8WXI3 467 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 ZDHHC16Q969W1 377 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 KIRREL1Q96J84 757 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 MAP1LC3BQ9GZQ8 125 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 KCNE5Q9UJ90 142 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 FTCDNL1E5RQL4 147 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 MPGP29372 298 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 RAB9AP51151 201 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 TAS2R30P59541 319 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 ACACBO00763 2458 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 REG1BP48304 166 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 RELBQ01201 579 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 KIAA0040Q15053 153 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 ITPRIPL2Q3MIP1 535 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 OR8D4Q8NGM9 314 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 CDKN2AP42771 156 aaKnown RBP3.14□□□□□ -1.91
SYNE1-201ENST00000341594 NIT1Q86X76 327 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 SLC35G3Q8N808 338 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 OR51S1Q8NGJ8 323 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 HARBI1Q96MB7 349 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 TAC3Q9UHF0 121 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 H3BVH4 76 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 SLAQ13239 276 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 SFXN4Q6P4A7 337 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 NXPH2O95156 264 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 SLC35E2P0CK97 266 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 GLB1P16278 677 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 MPLP40238 635 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 RAC3P60763 192 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 HOXA4Q00056 320 aaPredicted RBP3.14□□□□□ -1.91
SYNE1-201ENST00000341594 GGTLC2Q14390 218 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 HIKESHIQ53FT3 197 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 FOXC2Q99958 501 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 GGACTQ9BVM4 153 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 LTBP2Q14767 1821 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 HIST1H1TP22492 207 aaPredicted RBP3.14□□□□□ -1.91
SYNE1-201ENST00000341594 OR8I2Q8N0Y5 310 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 OR4K5Q8NGD3 323 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 MRPS33Q9Y291 106 aaKnown RBP3.14□□□□□ -1.91
SYNE1-201ENST00000341594 KCNMB2Q9Y691 235 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 S4R3C0 116 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 OR2M5A3KFT3 312 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 GRPP07492 148 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 ZNF79Q15937 498 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 PEF1Q9UBV8 284 aaKnown RBP3.14□□□□□ -1.91
SYNE1-201ENST00000341594 MYO18BQ8IUG5 2567 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 CCR8P51685 355 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 MRGPRX4Q96LA9 322 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 C20orf144Q9BQM9 153 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 PLEKHA3Q9HB20 300 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 LSM2Q9Y333 95 aaKnown RBP3.14□□□□□ -1.91
SYNE1-201ENST00000341594 GZMMP51124 257 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 MALLQ13021 153 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 JOSD1Q15040 202 aaPredicted RBP3.14□□□□□ -1.91
SYNE1-201ENST00000341594 STRADBQ9C0K7 418 aa3.14□□□□□ -1.91
SYNE1-201ENST00000341594 PDGFBP01127 241 aaPredicted RBP3.13□□□□□ -1.91
SYNE1-201ENST00000341594 CTSBP07858 339 aa3.13□□□□□ -1.91
SYNE1-201ENST00000341594 CXCL2P19875 107 aa3.13□□□□□ -1.91
SYNE1-201ENST00000341594 GCSHP23434 173 aa3.13□□□□□ -1.91
SYNE1-201ENST00000341594 CD200P41217 278 aa3.13□□□□□ -1.91
SYNE1-201ENST00000341594 ZNF385BQ569K4 471 aa3.13□□□□□ -1.91
SYNE1-201ENST00000341594 GLYATL1Q969I3 302 aa3.13□□□□□ -1.91
SYNE1-201ENST00000341594 NXPE3Q969Y0 559 aa3.13□□□□□ -1.91
SYNE1-201ENST00000341594 GINS3Q9BRX5 216 aa3.13□□□□□ -1.91
SYNE1-201ENST00000341594 FOXQ1Q9C009 403 aa3.13□□□□□ -1.91
SYNE1-201ENST00000341594 TRAT1Q6PIZ9 186 aa3.13□□□□□ -1.91
SYNE1-201ENST00000341594 RHBDD1Q8TEB9 315 aa3.13□□□□□ -1.91
SYNE1-201ENST00000341594 ZNF665Q9H7R5 613 aa3.13□□□□□ -1.91
SYNE1-201ENST00000341594 LOC100289279A0A1B0GTE1 492 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms