RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 DMXL1Q9Y485 3027 aa12.48□□□□□ -0.41
TDP2-201ENST00000341060 ZNF724A8MTY0 619 aa12.48□□□□□ -0.41
TDP2-201ENST00000341060 RAB5CP51148 216 aa12.48□□□□□ -0.41
TDP2-201ENST00000341060 HERPUD1Q15011 391 aa12.48□□□□□ -0.41
TDP2-201ENST00000341060 HMGN3Q15651 99 aa12.48□□□□□ -0.41
TDP2-201ENST00000341060 CDCP2Q5VXM1 449 aa12.48□□□□□ -0.41
TDP2-201ENST00000341060 TBC1D26Q86UD7 250 aa12.48□□□□□ -0.41
TDP2-201ENST00000341060 AKR1E2Q96JD6 320 aa12.48□□□□□ -0.41
TDP2-201ENST00000341060 HS3ST6Q96QI5 342 aa12.48□□□□□ -0.41
TDP2-201ENST00000341060 C11orf1Q9H5F2 150 aa12.48□□□□□ -0.41
TDP2-201ENST00000341060 RNF122Q9H9V4 155 aa12.48□□□□□ -0.41
TDP2-201ENST00000341060 ZNF175Q9Y473 711 aa12.48□□□□□ -0.41
TDP2-201ENST00000341060 KPTNQ9Y664 436 aa12.48□□□□□ -0.41
TDP2-201ENST00000341060 NKX2-6A6NCS4 301 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 FAM166BA8MTA8 275 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 ZNF732B4DXR9 585 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 NME2P1O60361 137 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 EWSR1Q01844 656 aaKnown RBP eCLIP12.47□□□□□ -0.41
TDP2-201ENST00000341060 ZNF616Q08AN1 781 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 OR1C1Q15619 314 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 ZNF818PQ6ZRF7 136 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 MKXQ8IYA7 352 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 SECTM1Q8WVN6 248 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 APH1AQ96BI3 265 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 GPR87Q9BY21 358 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 SAV1Q9H4B6 383 aaPredicted RBP12.47□□□□□ -0.41
TDP2-201ENST00000341060 OPA3Q9H6K4 179 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 FOXJ2Q9P0K8 574 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 ABI3Q9P2A4 366 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 IL36RNQ9UBH0 155 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 CACFD1Q9UGQ2 172 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 LHX6Q9UPM6 363 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 KIR2DS1A0A191URI9 304 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 PRR33A8MZF0 331 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 TRAPPC2LH3BP13 241 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 ZNHIT1O43257 154 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 SCTP09683 121 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 LMO1P25800 156 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 ARR3P36575 388 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 KIR2DS4P43632 304 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 CAMLGP49069 296 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 RAB13P51153 203 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 KIR2DS1Q14954 304 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 SPIN3Q5JUX0 258 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 ZNF695Q8IW36 515 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 OR2C3Q8N628 320 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 ZNF565Q8N9K5 539 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 OR5A2Q8NGI9 324 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 POM121L2Q96KW2 1035 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 SPIN2AQ99865 258 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 SPIN2BQ9BPZ2 258 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 SCRT1Q9BWW7 348 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 SH3BGRL3Q9H299 93 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 ZNF552Q9H707 407 aaPredicted RBP12.47□□□□□ -0.41
TDP2-201ENST00000341060 UBE2J1Q9Y385 318 aaPredicted RBP12.47□□□□□ -0.41
TDP2-201ENST00000341060 STRAPQ9Y3F4 350 aaKnown RBP12.47□□□□□ -0.41
TDP2-201ENST00000341060 ATP23Q9Y6H3 246 aa12.47□□□□□ -0.41
TDP2-201ENST00000341060 DUXBA0A1W2PPF3 345 aa12.46□□□□□ -0.41
TDP2-201ENST00000341060 SLC22A20A6NK97 555 aa12.46□□□□□ -0.41
TDP2-201ENST00000341060 TUSC2O75896 110 aa12.46□□□□□ -0.41
TDP2-201ENST00000341060 NGFP01138 241 aa12.46□□□□□ -0.41
TDP2-201ENST00000341060 PAX6P26367 422 aa12.46□□□□□ -0.41
TDP2-201ENST00000341060 NKX2-1P43699 371 aaPredicted RBP12.46□□□□□ -0.41
TDP2-201ENST00000341060 FHITP49789 147 aa12.46□□□□□ -0.41
TDP2-201ENST00000341060 PPT1P50897 306 aa12.46□□□□□ -0.41
TDP2-201ENST00000341060 RAB1AP62820 205 aa12.46□□□□□ -0.41
TDP2-201ENST00000341060 DCAF10Q5QP82 559 aa12.46□□□□□ -0.41
TDP2-201ENST00000341060 LINC00596Q86U02 117 aa12.46□□□□□ -0.41
TDP2-201ENST00000341060 HSD17B11Q8NBQ5 300 aa12.46□□□□□ -0.41
TDP2-201ENST00000341060 ABHD14BQ96IU4 210 aa12.46□□□□□ -0.41
TDP2-201ENST00000341060 C19orf12Q9NSK7 152 aa12.46□□□□□ -0.41
TDP2-201ENST00000341060 MEX3AA1L020 520 aaKnown RBP12.46□□□□□ -0.42
TDP2-201ENST00000341060 CLEC18AA5D8T8 446 aa12.46□□□□□ -0.42
TDP2-201ENST00000341060 C21orf140B9A014 251 aa12.46□□□□□ -0.42
TDP2-201ENST00000341060 CTXN2P0C2S0 81 aa12.46□□□□□ -0.42
TDP2-201ENST00000341060 PEA15Q15121 130 aa12.46□□□□□ -0.42
TDP2-201ENST00000341060 GUK1Q16774 197 aa12.46□□□□□ -0.42
TDP2-201ENST00000341060 AVPI1Q5T686 147 aa12.46□□□□□ -0.42
TDP2-201ENST00000341060 C5orf24Q7Z6I8 188 aa12.46□□□□□ -0.42
TDP2-201ENST00000341060 MED12LQ86YW9 2145 aa12.46□□□□□ -0.42
TDP2-201ENST00000341060 SELENOHQ8IZQ5 122 aaKnown RBP12.46□□□□□ -0.42
TDP2-201ENST00000341060 LINC00518Q8N0U6 118 aa12.46□□□□□ -0.42
TDP2-201ENST00000341060 GAPTQ8N292 157 aa12.46□□□□□ -0.42
TDP2-201ENST00000341060 TMEM251Q8N6I4 163 aa12.46□□□□□ -0.42
TDP2-201ENST00000341060 CLEC18CQ8NCF0 446 aa12.46□□□□□ -0.42
TDP2-201ENST00000341060 RXFP4Q8TDU9 374 aa12.46□□□□□ -0.42
TDP2-201ENST00000341060 GTF3AQ92664 365 aaKnown RBP12.46□□□□□ -0.42
TDP2-201ENST00000341060 PLK3Q9H4B4 646 aa12.46□□□□□ -0.42
TDP2-201ENST00000341060 IGKV1D-13A0A0B4J2D9 117 aa12.45□□□□□ -0.42
TDP2-201ENST00000341060 A0A1W2PNU3 283 aaPredicted RBP12.45□□□□□ -0.42
TDP2-201ENST00000341060 CDX4O14627 284 aaPredicted RBP12.45□□□□□ -0.42
TDP2-201ENST00000341060 SYNGR1O43759 233 aa12.45□□□□□ -0.42
TDP2-201ENST00000341060 C1QL1O75973 258 aa12.45□□□□□ -0.42
TDP2-201ENST00000341060 IGKV1-13P0DP09 117 aa12.45□□□□□ -0.42
TDP2-201ENST00000341060 UCP1P25874 307 aa12.45□□□□□ -0.42
TDP2-201ENST00000341060 ITGA3P26006 1051 aa12.45□□□□□ -0.42
TDP2-201ENST00000341060 ZNF266Q14584 549 aa12.45□□□□□ -0.42
TDP2-201ENST00000341060 RNPS1Q15287 305 aaKnown RBP12.45□□□□□ -0.42
TDP2-201ENST00000341060 TSC22D1Q15714 1073 aa12.45□□□□□ -0.42
TDP2-201ENST00000341060 NEK7Q8TDX7 302 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms