RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 FUOMA2VDF0 154 aa12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 MAGEA13PA6NCF6 341 aa12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 RBMY1BA6NDE4 496 aaKnown RBP12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 RBMY1EA6NEQ0 496 aaKnown RBP12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 SLC33A1O00400 549 aaPredicted RBP12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 HMGN1P05114 100 aa12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 CSN2P05814 226 aa12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 RBMY1DP0C7P1 496 aaKnown RBP12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 MYF6P23409 242 aa12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 SLURP1P55000 103 aa12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 BCDIN3DQ7Z5W3 292 aaKnown RBP12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 MOB3BQ86TA1 216 aa12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 HAPLN4Q86UW8 402 aa12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 GIPC3Q8TF64 312 aa12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 RFT1Q96AA3 541 aa12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 COMMD4Q9H0A8 199 aa12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 PLEKHA1Q9HB21 404 aa12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 CALYQ9NYX4 217 aa12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 IDI2-AS1Q9NZ38 188 aa12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 TMEM14AQ9Y6G1 99 aa12.65□□□□□ -0.38
NECTIN1-202ENST00000340882 ZNF736B4DX44 427 aaPredicted RBP12.64□□□□□ -0.39
NECTIN1-202ENST00000340882 HSD17B6O14756 317 aa12.64□□□□□ -0.39
NECTIN1-202ENST00000340882 RPP14O95059 124 aaKnown RBP12.64□□□□□ -0.39
NECTIN1-202ENST00000340882 ZNF44P15621 663 aa12.64□□□□□ -0.39
NECTIN1-202ENST00000340882 VDAC1P21796 283 aa12.64□□□□□ -0.39
NECTIN1-202ENST00000340882 RUNX1Q01196 453 aa12.64□□□□□ -0.39
NECTIN1-202ENST00000340882 GABPB1Q06547 395 aaPredicted RBP12.64□□□□□ -0.39
NECTIN1-202ENST00000340882 ZNF816Q0VGE8 651 aaPredicted RBP12.64□□□□□ -0.39
NECTIN1-202ENST00000340882 SSX6Q7RTT6 188 aa12.64□□□□□ -0.39
NECTIN1-202ENST00000340882 PGAM4Q8N0Y7 254 aa12.64□□□□□ -0.39
NECTIN1-202ENST00000340882 FAM71E2Q8N5Q1 922 aa12.64□□□□□ -0.39
NECTIN1-202ENST00000340882 RFESDQ8TAC1 157 aa12.64□□□□□ -0.39
NECTIN1-202ENST00000340882 UBE2E2Q96LR5 201 aa12.64□□□□□ -0.39
NECTIN1-202ENST00000340882 S1PR3Q99500 378 aa12.64□□□□□ -0.39
NECTIN1-202ENST00000340882 OSBPL10Q9BXB5 764 aa12.64□□□□□ -0.39
NECTIN1-202ENST00000340882 KIAA1456Q9P272 454 aa12.64□□□□□ -0.39
NECTIN1-202ENST00000340882 DNAH10Q8IVF4 4471 aa12.63□□□□□ -0.39
NECTIN1-202ENST00000340882 SYT7O43581 403 aa12.63□□□□□ -0.39
NECTIN1-202ENST00000340882 RRP9O43818 475 aaKnown RBP12.63□□□□□ -0.39
NECTIN1-202ENST00000340882 GATBO75879 557 aaKnown RBP12.63□□□□□ -0.39
NECTIN1-202ENST00000340882 PRDX6P30041 224 aa12.63□□□□□ -0.39
NECTIN1-202ENST00000340882 PPIFP30405 207 aaKnown RBP12.63□□□□□ -0.39
NECTIN1-202ENST00000340882 GLP1RP43220 463 aa12.63□□□□□ -0.39
NECTIN1-202ENST00000340882 RBP2P50120 134 aa12.63□□□□□ -0.39
NECTIN1-202ENST00000340882 ATP1B3P54709 279 aa12.63□□□□□ -0.39
NECTIN1-202ENST00000340882 F2RL1P55085 397 aa12.63□□□□□ -0.39
NECTIN1-202ENST00000340882 PDZK1IP1Q13113 114 aa12.63□□□□□ -0.39
NECTIN1-202ENST00000340882 IZUMO1Q8IYV9 350 aa12.63□□□□□ -0.39
NECTIN1-202ENST00000340882 HS3ST5Q8IZT8 346 aa12.63□□□□□ -0.39
NECTIN1-202ENST00000340882 HAVCR2Q8TDQ0 301 aa12.63□□□□□ -0.39
NECTIN1-202ENST00000340882 ADAT3Q96EY9 351 aaPredicted RBP12.63□□□□□ -0.39
NECTIN1-202ENST00000340882 KIF25Q9UIL4 384 aa12.63□□□□□ -0.39
NECTIN1-202ENST00000340882 TRAV39A0A0B4J263 110 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 G3V318 75 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 HSPB6O14558 160 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 MPZL2O60487 215 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 IGF1P05019 195 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 OSMP13725 252 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 MTCP1P56278 107 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 BNIP1Q12981 228 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 CDK5R1Q15078 307 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 ACSM6Q6P461 480 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 HDXQ7Z353 690 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 SLC35F2Q8IXU6 374 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 RDH10Q8IZV5 341 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 TMEM104Q8NE00 496 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 DNAAF1Q8NEP3 725 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 OR2T10Q8NGZ9 312 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 ARPC1AQ92747 370 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 SPACA5Q96QH8 159 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 CNN2Q99439 309 aaKnown RBP12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 RASL11BQ9BPW5 248 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 SPATA25Q9BR10 227 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 LINC00574Q9H8X3 128 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 TVP23BQ9NYZ1 205 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 OR6C3Q9NZP0 311 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 VSIG4Q9Y279 399 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 WSB1Q9Y6I7 421 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 KMT2AQ03164 3969 aa12.62□□□□□ -0.39
NECTIN1-202ENST00000340882 KIAA1109Q2LD37 5005 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 A8MZ25 164 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 NPIPB11E5RHQ5 1161 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 KDM4BO94953 1096 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 CYB5AP00167 134 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 IL1AP01583 271 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 HTR1FP30939 366 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 HAGHQ16775 308 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 PRSS35Q8N3Z0 413 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 OR51T1Q8NGJ9 327 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 OR5D18Q8NGL1 313 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 OR6Q1Q8NGQ2 317 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 OR10X1Q8NGY0 326 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 ST6GALNAC6Q969X2 333 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 MAGIXQ9H6Y5 334 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 ADGRL4Q9HBW9 690 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 RETNQ9HD89 108 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 ACTR3BQ9P1U1 418 aa12.61□□□□□ -0.39
NECTIN1-202ENST00000340882 MEIKINA0A087WXM9 373 aa12.6□□□□□ -0.39
NECTIN1-202ENST00000340882 M0R129 80 aa12.6□□□□□ -0.39
NECTIN1-202ENST00000340882 IGLV1-40P01703 118 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms