RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 CNN3Q15417 329 aaKnown RBP13.92□□□□□ -0.18
SCARB1-202ENST00000339570 DPPA2Q7Z7J5 298 aa13.92□□□□□ -0.18
SCARB1-202ENST00000339570 C18orf12Q96KH6 178 aa13.92□□□□□ -0.18
SCARB1-202ENST00000339570 SNX22Q96L94 193 aa13.92□□□□□ -0.18
SCARB1-202ENST00000339570 NIPSNAP3BQ9BS92 247 aa13.92□□□□□ -0.18
SCARB1-202ENST00000339570 SUCNR1Q9BXA5 334 aa13.92□□□□□ -0.18
SCARB1-202ENST00000339570 GAR1Q9NY12 217 aaKnown RBP13.92□□□□□ -0.18
SCARB1-202ENST00000339570 RNF224P0DH78 156 aa13.92□□□□□ -0.18
SCARB1-202ENST00000339570 BCL3P20749 454 aa13.92□□□□□ -0.18
SCARB1-202ENST00000339570 NKX6-1P78426 367 aaPredicted RBP13.92□□□□□ -0.18
SCARB1-202ENST00000339570 DEFA6Q01524 100 aa13.92□□□□□ -0.18
SCARB1-202ENST00000339570 WDR25Q64LD2 544 aaPredicted RBP13.92□□□□□ -0.18
SCARB1-202ENST00000339570 HEPN1Q6WQI6 88 aa13.92□□□□□ -0.18
SCARB1-202ENST00000339570 ABHD3Q8WU67 409 aa13.92□□□□□ -0.18
SCARB1-202ENST00000339570 MEGF10Q96KG7 1140 aa13.92□□□□□ -0.18
SCARB1-202ENST00000339570 SGCZQ96LD1 299 aa13.92□□□□□ -0.18
SCARB1-202ENST00000339570 VSIRQ9H7M9 311 aa13.92□□□□□ -0.18
SCARB1-202ENST00000339570 LOC400499M0QZD8 3231 aa13.92□□□□□ -0.18
SCARB1-202ENST00000339570 IGLV3-19P01714 112 aa13.91□□□□□ -0.18
SCARB1-202ENST00000339570 IGHV2-70P01814 119 aa13.91□□□□□ -0.18
SCARB1-202ENST00000339570 PSG4Q00888 419 aa13.91□□□□□ -0.18
SCARB1-202ENST00000339570 HIST3H3Q16695 136 aa13.91□□□□□ -0.18
SCARB1-202ENST00000339570 UNQ6494/PRO21346Q6UXR6 183 aa13.91□□□□□ -0.18
SCARB1-202ENST00000339570 AAED1Q7RTV5 226 aa13.91□□□□□ -0.18
SCARB1-202ENST00000339570 CCDC71LQ8N9Z2 235 aa13.91□□□□□ -0.18
SCARB1-202ENST00000339570 TCEAL7Q9BRU2 100 aa13.91□□□□□ -0.18
SCARB1-202ENST00000339570 ZNF665Q9H7R5 613 aa13.91□□□□□ -0.18
SCARB1-202ENST00000339570 HSPA12AO43301 675 aa13.91□□□□□ -0.18
SCARB1-202ENST00000339570 ARL6IP1Q15041 203 aa13.91□□□□□ -0.18
SCARB1-202ENST00000339570 WIPI1Q5MNZ9 446 aaPredicted RBP13.91□□□□□ -0.18
SCARB1-202ENST00000339570 ZIC4Q8N9L1 334 aa13.91□□□□□ -0.18
SCARB1-202ENST00000339570 ZNF610Q8N9Z0 462 aa13.91□□□□□ -0.18
SCARB1-202ENST00000339570 INTS12Q96CB8 462 aaKnown RBP13.91□□□□□ -0.18
SCARB1-202ENST00000339570 SSX3Q99909 188 aa13.91□□□□□ -0.18
SCARB1-202ENST00000339570 PPIHO43447 177 aaKnown RBP13.9□□□□□ -0.18
SCARB1-202ENST00000339570 SOD3P08294 240 aa13.9□□□□□ -0.18
SCARB1-202ENST00000339570 IL13RA2Q14627 380 aa13.9□□□□□ -0.18
SCARB1-202ENST00000339570 STRAPQ9Y3F4 350 aaKnown RBP13.9□□□□□ -0.18
SCARB1-202ENST00000339570 COL4A2P08572 1712 aa13.9□□□□□ -0.18
SCARB1-202ENST00000339570 PDCD6O75340 191 aa13.9□□□□□ -0.18
SCARB1-202ENST00000339570 SCAF4O95104 1147 aaKnown RBP13.9□□□□□ -0.18
SCARB1-202ENST00000339570 METTL15P1P0C7V9 234 aa13.9□□□□□ -0.18
SCARB1-202ENST00000339570 CCL4P13236 92 aa13.9□□□□□ -0.18
SCARB1-202ENST00000339570 ZNF266Q14584 549 aa13.9□□□□□ -0.18
SCARB1-202ENST00000339570 SPSB3Q6PJ21 355 aa13.9□□□□□ -0.18
SCARB1-202ENST00000339570 IL22RA1Q8N6P7 574 aa13.9□□□□□ -0.18
SCARB1-202ENST00000339570 CCDC54Q8NEL0 328 aa13.9□□□□□ -0.18
SCARB1-202ENST00000339570 LYPD6BQ8NI32 183 aa13.9□□□□□ -0.18
SCARB1-202ENST00000339570 MUCL1Q96DR8 90 aa13.9□□□□□ -0.18
SCARB1-202ENST00000339570 IGHV5-10-1A0A0J9YXX1 117 aa13.9□□□□□ -0.18
SCARB1-202ENST00000339570 GAMTQ14353 236 aa13.9□□□□□ -0.18
SCARB1-202ENST00000339570 LRFN1Q9P244 771 aa13.9□□□□□ -0.18
SCARB1-202ENST00000339570 ZIC3O60481 467 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 HIST1H2BKO60814 126 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 TK1P04183 234 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 HIST1H2BJP06899 126 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 RFPL3SP0C7P2 107 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 HOXB1P14653 301 aaPredicted RBP13.89□□□□□ -0.19
SCARB1-202ENST00000339570 HIST1H2BOP23527 126 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 HIST1H2BBP33778 126 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 CARD18P57730 90 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 HIST1H2BDP58876 126 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 HIST1H2BCP62807 126 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 ELOBQ15370 118 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 TESK1Q15569 626 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 HIST2H2BEQ16778 126 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.89□□□□□ -0.19
SCARB1-202ENST00000339570 BEND4Q6ZU67 534 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 HIST1H2BHQ93079 126 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 TAAR9Q96RI9 348 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 HIST1H2BNQ99877 126 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 HIST1H2BMQ99879 126 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 SMOC1Q9H4F8 434 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 GTF3C1Q12789 2109 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 PPP1R2P9O14990 202 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 SRP19P09132 144 aaKnown RBP13.89□□□□□ -0.19
SCARB1-202ENST00000339570 ECI1P42126 302 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 RABEPKQ7Z6M1 372 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 LRP11Q86VZ4 500 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 OR56B2PQ8NGI1 322 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 MOB3AQ96BX8 217 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 WFIKKN1Q96NZ8 548 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 A0A0G2JRQ6 117 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 A0A1B0GV90 55 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 TRDCB7Z8K6 153 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 RRP8O43159 456 aaKnown RBP13.89□□□□□ -0.19
SCARB1-202ENST00000339570 PGA5P0DJD9 388 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 OTX2P32243 289 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 PLEKHF2Q9H8W4 249 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 CALHM2Q9HA72 323 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 PPP1R3CQ9UQK1 317 aa13.89□□□□□ -0.19
SCARB1-202ENST00000339570 CEBPZOSA8MTT3 80 aa13.88□□□□□ -0.19
SCARB1-202ENST00000339570 FUT3P21217 361 aa13.88□□□□□ -0.19
SCARB1-202ENST00000339570 ICAM4Q14773 271 aa13.88□□□□□ -0.19
SCARB1-202ENST00000339570 HIST2H3PS2Q5TEC6 136 aa13.88□□□□□ -0.19
SCARB1-202ENST00000339570 OR4D5Q8NGN0 318 aa13.88□□□□□ -0.19
SCARB1-202ENST00000339570 SPSB1Q96BD6 273 aa13.88□□□□□ -0.19
SCARB1-202ENST00000339570 GALNT14Q96FL9 552 aa13.88□□□□□ -0.19
SCARB1-202ENST00000339570 PLK3Q9H4B4 646 aa13.88□□□□□ -0.19
SCARB1-202ENST00000339570 UFSP2Q9NUQ7 469 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 158.3 ms