RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SLC35E4Q6ICL7 350 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 FAM89BQ8N5H3 189 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 KIR3DL3Q8N743 410 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 ZNF565Q8N9K5 539 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 SLC25A46Q96AG3 418 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 DACT3Q96B18 629 aaPredicted RBP9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 BEX2Q9BXY8 128 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 TMPRSS13Q9BYE2 586 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 LPAR5Q9H1C0 372 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 DCSTAMPQ9H295 470 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 NCOR1P1Q9H4R4 102 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 C19orf12Q9NSK7 152 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 PLEKHJ1Q9NW61 149 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 ING3Q9NXR8 418 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 OR6C3Q9NZP0 311 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 ONECUT1Q9UBC0 465 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 ETV7Q9Y603 341 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 KPTNQ9Y664 436 aa9.83□□□□□ -0.84
SPTLC1-202ENST00000337841 MALRD1Q5VYJ5 2156 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 ACANP16112 2415 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 FLNAP21333 2647 aaKnown RBP9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 HIVEP1P15822 2718 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 A0A0B4J203 849 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 CCDC160A6NGH7 325 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 M0R1W7 72 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 CA11O75493 328 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 TOX4O94842 621 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 SNRPBP14678 240 aaKnown RBP9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 SRP14P37108 136 aaKnown RBP9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 GLIPR1P48060 266 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 VEGFCP49767 419 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 ATXN7L3Q14CW9 347 aaPredicted RBP9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 NKAPLQ5M9Q1 402 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 BRICD5Q6PL45 260 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 METAP1DQ6UB28 335 aaPredicted RBP9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 Q6ZTK2 550 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 TRAPPC6BQ86SZ2 158 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 NANPQ8TBE9 248 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 CORO2AQ92828 525 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 PHF21AQ96BD5 680 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 WDFY2Q96P53 400 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 ATG5Q9H1Y0 275 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 KCNK15Q9H427 330 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 ETAA1Q9NY74 926 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 PLA2G2EQ9NZK7 142 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 RCC2Q9P258 522 aaKnown RBP9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 CDC42EP3Q9UKI2 254 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 UBE2J1Q9Y385 318 aaPredicted RBP9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 AKAP9Q99996 3911 aa9.82□□□□□ -0.84
SPTLC1-202ENST00000337841 CSPG4Q6UVK1 2322 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 MEIKINA0A087WXM9 373 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 TMEM30CPA0ZSE6 113 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 ODAMA1E959 279 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 UBE2QL1A1L167 161 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 SOCS1O15524 211 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 SCGNO76038 276 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 PAHP00439 452 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 MT-ND4P03905 459 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 ZNF728P0DKX0 622 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 GZMHP20718 246 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 CHATP28329 748 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 PAX5Q02548 391 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 ARL6IP1Q15041 203 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 SIGIRRQ6IA17 410 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 MZT2AQ6P582 158 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 TPRX1Q8N7U7 411 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 ACOT12Q8WYK0 555 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 COQ2Q96H96 371 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 NICN1Q9BSH3 213 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 PCGF1Q9BSM1 259 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 FAAP24Q9BTP7 215 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 METTL8Q9H825 291 aaKnown RBP9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 TAS2R3Q9NYW6 316 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 NDUFA13Q9P0J0 144 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 ZNF581Q9P0T4 197 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 OPN4Q9UHM6 478 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 KIF25Q9UIL4 384 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 HSF4Q9ULV5 492 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 SPATA2Q9UM82 520 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 LINC00312Q9Y6C7 94 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 CEPT1Q9Y6K0 416 aa9.81□□□□□ -0.84
SPTLC1-202ENST00000337841 CR1P17927 2039 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 F8P00451 2351 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 ABCA1O95477 2261 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 INAFM1C9JVW0 142 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 AVPP01185 164 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 ZNF182P17025 639 aaPredicted RBP9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 PRTN3P24158 256 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 SOX6P35712 828 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 EFNB2P52799 333 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 TMEM50BP56557 158 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 SCGB2A2Q13296 93 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 DYNC1I2Q13409 638 aaKnown RBP9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 CHRFAM7AQ494W8 412 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 RSBN1Q5VWQ0 802 aaPredicted RBP9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 ZNF497Q6ZNH5 498 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 C6orf201Q7Z4U5 140 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 OR10R2Q8NGX6 335 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 NDNFQ8TB73 568 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 PLPPR1Q8TBJ4 325 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms