RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 ASCC1Q8N9N2 400 aaKnown RBP12.33□□□□□ -0.44
CBX3-201ENST00000337620 DEFB108BQ8NET1 73 aa12.33□□□□□ -0.44
CBX3-201ENST00000337620 PLPPR1Q8TBJ4 325 aa12.33□□□□□ -0.44
CBX3-201ENST00000337620 CCL17Q92583 94 aa12.33□□□□□ -0.44
CBX3-201ENST00000337620 RIMS4Q9H426 269 aaPredicted RBP12.33□□□□□ -0.44
CBX3-201ENST00000337620 COL12A1Q99715 3063 aa12.33□□□□□ -0.44
CBX3-201ENST00000337620 USP9XQ93008 2570 aaPredicted RBP12.33□□□□□ -0.44
CBX3-201ENST00000337620 IGKV1D-17A0A075B6S4 117 aa12.32□□□□□ -0.44
CBX3-201ENST00000337620 MDH2P40926 338 aaKnown RBP12.32□□□□□ -0.44
CBX3-201ENST00000337620 BTG1P62324 171 aa12.32□□□□□ -0.44
CBX3-201ENST00000337620 CDK10Q15131 360 aa12.32□□□□□ -0.44
CBX3-201ENST00000337620 C20orf204Q6ZNR8 217 aa12.32□□□□□ -0.44
CBX3-201ENST00000337620 MRPL30Q8TCC3 161 aaKnown RBP12.32□□□□□ -0.44
CBX3-201ENST00000337620 CCDC107Q8WV48 283 aa12.32□□□□□ -0.44
CBX3-201ENST00000337620 Q9N2K0 584 aa12.32□□□□□ -0.44
CBX3-201ENST00000337620 A0A1W2PPR1 153 aa12.32□□□□□ -0.44
CBX3-201ENST00000337620 HPXP02790 462 aa12.32□□□□□ -0.44
CBX3-201ENST00000337620 RLN1P04808 185 aa12.32□□□□□ -0.44
CBX3-201ENST00000337620 GSTT2P0CG29 244 aa12.32□□□□□ -0.44
CBX3-201ENST00000337620 AGAP6Q5VW22 663 aa12.32□□□□□ -0.44
CBX3-201ENST00000337620 OVCH2Q7RTZ1 564 aa12.32□□□□□ -0.44
CBX3-201ENST00000337620 CBLN4Q9NTU7 201 aa12.32□□□□□ -0.44
CBX3-201ENST00000337620 SLC2A8Q9NY64 477 aa12.32□□□□□ -0.44
CBX3-201ENST00000337620 ALG5Q9Y673 324 aa12.32□□□□□ -0.44
CBX3-201ENST00000337620 TMEM82A0PJX8 343 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 A6NNC1 897 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 ZNF497Q6ZNH5 498 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 C17orf107Q6ZR85 190 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 C5orf24Q7Z6I8 188 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 TMEM17Q86X19 198 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 ARRDC1Q8N5I2 433 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 OR13C8Q8NGS7 320 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 DACT3Q96B18 629 aaPredicted RBP12.31□□□□□ -0.44
CBX3-201ENST00000337620 SLC25A21Q9BQT8 299 aaPredicted RBP12.31□□□□□ -0.44
CBX3-201ENST00000337620 NECAP2Q9NVZ3 263 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 DOPEY1Q5JWR5 2465 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 CHD6Q8TD26 2715 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 UBR5O95071 2799 aaPredicted RBP12.31□□□□□ -0.44
CBX3-201ENST00000337620 TRAV39A0A0B4J263 110 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 H7C1Q1 480 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 PEX14O75381 377 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 SOD3P08294 240 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 RCC1P18754 421 aaPredicted RBP12.31□□□□□ -0.44
CBX3-201ENST00000337620 PPOXP50336 477 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 AESQ08117 197 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 SHEQ5VZ18 495 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 C1orf87Q8N0U7 546 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 TERB2Q8NHR7 220 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 ANGPTL6Q8NI99 470 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 UBTD1Q9HAC8 227 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 TMEM106BQ9NUM4 274 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 TRAPPC2LQ9UL33 140 aa12.31□□□□□ -0.44
CBX3-201ENST00000337620 SPTAN1Q13813 2472 aaKnown RBP12.3□□□□□ -0.44
CBX3-201ENST00000337620 IGHV1-69-2A0A0G2JMI3 117 aa12.3□□□□□ -0.44
CBX3-201ENST00000337620 OOEPA6NGQ2 149 aa12.3□□□□□ -0.44
CBX3-201ENST00000337620 CD8AP01732 235 aa12.3□□□□□ -0.44
CBX3-201ENST00000337620 OR5H8P0DN80 308 aa12.3□□□□□ -0.44
CBX3-201ENST00000337620 ANXA7P20073 488 aaKnown RBP12.3□□□□□ -0.44
CBX3-201ENST00000337620 OR3A1P47881 315 aa12.3□□□□□ -0.44
CBX3-201ENST00000337620 RAG2P55895 527 aa12.3□□□□□ -0.44
CBX3-201ENST00000337620 ZMYND11Q15326 602 aa12.3□□□□□ -0.44
CBX3-201ENST00000337620 GRK1Q15835 563 aa12.3□□□□□ -0.44
CBX3-201ENST00000337620 GIMAP1Q8WWP7 306 aa12.3□□□□□ -0.44
CBX3-201ENST00000337620 SHARPINQ9H0F6 387 aa12.3□□□□□ -0.44
CBX3-201ENST00000337620 LAMP3Q9UQV4 416 aa12.3□□□□□ -0.44
CBX3-201ENST00000337620 KLF2Q9Y5W3 355 aaPredicted RBP12.3□□□□□ -0.44
CBX3-201ENST00000337620 TRBV6-6A0A0A6YYG2 114 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 TRDCB7Z8K6 153 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 TMEM178BH3BS89 294 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 GYPAP02724 150 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 SCTP09683 121 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 NPY4RP50391 375 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 SEC61A1P61619 476 aaKnown RBP12.29□□□□□ -0.44
CBX3-201ENST00000337620 SRSF1Q07955 248 aaKnown RBP eCLIP12.29□□□□□ -0.444e-9■■□□□ 11.7
CBX3-201ENST00000337620 SRSF7Q16629 238 aaKnown RBP eCLIP12.29□□□□□ -0.44
CBX3-201ENST00000337620 IGSF11Q5DX21 431 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 Q6ZS49 121 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 ZNRF1Q8ND25 227 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 OR6F1Q8NGZ6 308 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 MRGPRFQ96AM1 343 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 TMPRSS13Q9BYE2 586 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 ZNF222Q9UK12 451 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 A0A0A6YYJ9 748 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 KIR2DS1A0A191URI9 304 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 TMEM30CPA0ZSE6 113 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 FABP7O15540 132 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 DANCRP0C864 163 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 MUC1P15941 1255 aaPredicted RBP12.29□□□□□ -0.44
CBX3-201ENST00000337620 KIR2DS4P43632 304 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 CBX3Q13185 183 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 KIR2DS1Q14954 304 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 TEX36Q5VZQ5 186 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 STUMQ69YW2 141 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 TMED4Q7Z7H5 227 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 MARCH1Q8TCQ1 289 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 ZNF2Q9BSG1 426 aaPredicted RBP12.29□□□□□ -0.44
CBX3-201ENST00000337620 RAB1BQ9H0U4 201 aa12.29□□□□□ -0.44
CBX3-201ENST00000337620 PPIAL4EA0A075B759 164 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 PPIAL4DF5H284 164 aa12.28□□□□□ -0.44
CBX3-201ENST00000337620 BET1O15155 118 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms