RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 SLC45A2Q9UMX9 530 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 SCN4AP35499 1836 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 NKX2-6A6NCS4 301 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 SEC11BP0C7V7 166 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 RHOBP62745 196 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 EWSR1Q01844 656 aaKnown RBP eCLIP12.07□□□□□ -0.482e-7■■■□□ 18.2
RTN4-202ENST00000337526 RNF151Q2KHN1 245 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 OR2M3Q8NG83 312 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 M1APQ8TC57 530 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 SLC25A38Q96DW6 304 aa12.07□□□□□ -0.48
RTN4-202ENST00000337526 MFNGO00587 321 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 MBPP02686 304 aaPredicted RBP12.06□□□□□ -0.48
RTN4-202ENST00000337526 MMP7P09237 267 aaPredicted RBP12.06□□□□□ -0.48
RTN4-202ENST00000337526 PMS2P11Q13670 270 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 PARP11Q9NR21 331 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 TRBV5-5A0A0J9YX44 114 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 FCN1O00602 326 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 CDIPTO14735 213 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 CFDP00746 253 aaPredicted RBP12.06□□□□□ -0.48
RTN4-202ENST00000337526 IGHV4-34P06331 123 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 F2RP25116 425 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 LRRC10Q5BKY1 277 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 TRAT1Q6PIZ9 186 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 TUSC5Q8IXB3 177 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 FAM122AQ96E09 287 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 ZNF385AQ96PM9 386 aaKnown RBP12.06□□□□□ -0.48
RTN4-202ENST00000337526 GPX7Q96SL4 187 aaPredicted RBP12.06□□□□□ -0.48
RTN4-202ENST00000337526 PARD6AQ9NPB6 346 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 KCNE5Q9UJ90 142 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 TIMM9Q9Y5J7 89 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 DUXBA0A1W2PPF3 345 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 KIAA1324LA8MWY0 1029 aaPredicted RBP12.06□□□□□ -0.48
RTN4-202ENST00000337526 FOXL2P58012 376 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 FOXO1Q12778 655 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 COL13A1Q5TAT6 717 aaPredicted RBP12.06□□□□□ -0.48
RTN4-202ENST00000337526 MOB3BQ86TA1 216 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 OR2T10Q8NGZ9 312 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 ZNRF4Q8WWF5 429 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 IL36GQ9NZH8 169 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 TCFL5Q9UL49 500 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 LOC102723971A0A1B0GUV8 181 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 C3orf80F5H4A9 247 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 KCNAB3O43448 404 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 ABHD3Q8WU67 409 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 HDHD3Q9BSH5 251 aaPredicted RBP12.06□□□□□ -0.48
RTN4-202ENST00000337526 FSCN3Q9NQT6 498 aa12.06□□□□□ -0.48
RTN4-202ENST00000337526 TRGV8A0A0C4DH27 118 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 PIN1P1O15428 100 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 UPK3AO75631 287 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 PNPP00491 289 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 OPRK1P41145 380 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 RAB7AP51149 207 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 NAAAQ02083 359 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 OR5I1Q13606 314 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 FAM78BQ5VT40 261 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 OR2H1Q9GZK4 316 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 SLC7A10Q9NS82 523 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 A0A1W2PP11 408 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 FGF2P09038 288 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 GNG4P50150 75 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 ERVS71-1P61550 626 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 ROM1Q03395 351 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 ZNF660Q6AZW8 331 aaPredicted RBP12.05□□□□□ -0.48
RTN4-202ENST00000337526 NAT8Q9UHE5 227 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 PRSS50Q9UI38 385 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 FSTP19883 344 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 HNRNPA3P51991 378 aaKnown RBP12.05□□□□□ -0.48
RTN4-202ENST00000337526 NOL4LQ96MY1 436 aaPredicted RBP12.05□□□□□ -0.48
RTN4-202ENST00000337526 NPAS1Q99742 590 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 GYPAP02724 150 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 RPL29P47914 159 aaKnown RBP12.05□□□□□ -0.48
RTN4-202ENST00000337526 DLK1P80370 383 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 OR11H4Q8NGC9 324 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 OR2T6Q8NHC8 308 aa12.05□□□□□ -0.48
RTN4-202ENST00000337526 SDK2Q58EX2 2172 aa12.04□□□□□ -0.48
RTN4-202ENST00000337526 SNRNP200O75643 2136 aaKnown RBP12.04□□□□□ -0.48
RTN4-202ENST00000337526 C4orf51C9J302 202 aa12.04□□□□□ -0.48
RTN4-202ENST00000337526 F12P00748 615 aaPredicted RBP12.04□□□□□ -0.48
RTN4-202ENST00000337526 CRYABP02511 175 aaKnown RBP12.04□□□□□ -0.48
RTN4-202ENST00000337526 BCL3P20749 454 aa12.04□□□□□ -0.48
RTN4-202ENST00000337526 PAX6P26367 422 aa12.04□□□□□ -0.48
RTN4-202ENST00000337526 VAX1Q5SQQ9 334 aa12.04□□□□□ -0.48
RTN4-202ENST00000337526 MYPOPQ86VE0 399 aaPredicted RBP12.04□□□□□ -0.48
RTN4-202ENST00000337526 DYRK2Q92630 601 aa12.04□□□□□ -0.48
RTN4-202ENST00000337526 MRGPRFQ96AM1 343 aa12.04□□□□□ -0.48
RTN4-202ENST00000337526 TMEM38BQ9NVV0 291 aa12.04□□□□□ -0.48
RTN4-202ENST00000337526 ZP4Q12836 540 aa12.04□□□□□ -0.48
RTN4-202ENST00000337526 SP7Q8TDD2 431 aaPredicted RBP12.04□□□□□ -0.48
RTN4-202ENST00000337526 BCL2L2Q92843 193 aaPredicted RBP12.04□□□□□ -0.48
RTN4-202ENST00000337526 GPR35Q9HC97 309 aa12.04□□□□□ -0.48
RTN4-202ENST00000337526 MYOFQ9NZM1 2061 aa12.04□□□□□ -0.48
RTN4-202ENST00000337526 TRAV39A0A0B4J263 110 aa12.04□□□□□ -0.48
RTN4-202ENST00000337526 ATP6V0CP27449 155 aa12.04□□□□□ -0.48
RTN4-202ENST00000337526 MOB3AQ96BX8 217 aa12.04□□□□□ -0.48
RTN4-202ENST00000337526 SMOC1Q9H4F8 434 aa12.04□□□□□ -0.48
RTN4-202ENST00000337526 Q9N2K0 584 aa12.04□□□□□ -0.48
RTN4-202ENST00000337526 VAX2Q9UIW0 290 aa12.04□□□□□ -0.48
RTN4-202ENST00000337526 H3BQ15 152 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 TOX4O94842 621 aa12.03□□□□□ -0.48
RTN4-202ENST00000337526 RCC1P18754 421 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms