RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 KCNG3Q8TAE7 436 aa12.04□□□□□ -0.48
SF1-202ENST00000334944 CDC6Q99741 560 aa12.04□□□□□ -0.48
SF1-202ENST00000334944 ZNF701Q9NV72 531 aaPredicted RBP12.04□□□□□ -0.48
SF1-202ENST00000334944 FAM230AA0A1W2PPH8 454 aa12.03□□□□□ -0.48
SF1-202ENST00000334944 SFT2D2O95562 160 aa12.03□□□□□ -0.48
SF1-202ENST00000334944 CER1O95813 267 aa12.03□□□□□ -0.48
SF1-202ENST00000334944 P04436 131 aa12.03□□□□□ -0.48
SF1-202ENST00000334944 GRB2P62993 217 aaKnown RBP12.03□□□□□ -0.48
SF1-202ENST00000334944 BATFQ16520 125 aa12.03□□□□□ -0.48
SF1-202ENST00000334944 C6orf201Q7Z4U5 140 aa12.03□□□□□ -0.48
SF1-202ENST00000334944 ABHD3Q8WU67 409 aa12.03□□□□□ -0.48
SF1-202ENST00000334944 MOB1AQ9H8S9 216 aa12.03□□□□□ -0.48
SF1-202ENST00000334944 TCFL5Q9UL49 500 aa12.03□□□□□ -0.48
SF1-202ENST00000334944 CHD3Q12873 2000 aaKnown RBP12.03□□□□□ -0.48
SF1-202ENST00000334944 CACNA1HO95180 2353 aa12.03□□□□□ -0.48
SF1-202ENST00000334944 DIRAS3O95661 229 aa12.03□□□□□ -0.48
SF1-202ENST00000334944 RPL29P47914 159 aaKnown RBP12.03□□□□□ -0.48
SF1-202ENST00000334944 CARD18P57730 90 aa12.03□□□□□ -0.48
SF1-202ENST00000334944 HOGA1Q86XE5 327 aa12.03□□□□□ -0.48
SF1-202ENST00000334944 TERB2Q8NHR7 220 aa12.03□□□□□ -0.48
SF1-202ENST00000334944 FGFBP3Q8TAT2 258 aa12.03□□□□□ -0.48
SF1-202ENST00000334944 HES7Q9BYE0 225 aa12.03□□□□□ -0.48
SF1-202ENST00000334944 PADI1Q9ULC6 663 aa12.03□□□□□ -0.48
SF1-202ENST00000334944 CCDC163A0A0D9SF12 145 aa12.02□□□□□ -0.48
SF1-202ENST00000334944 RPL36A-HNRNPH2H7BZ11 118 aa12.02□□□□□ -0.48
SF1-202ENST00000334944 CBR3O75828 277 aa12.02□□□□□ -0.48
SF1-202ENST00000334944 AMBPP02760 352 aa12.02□□□□□ -0.48
SF1-202ENST00000334944 AMY2BP19961 511 aa12.02□□□□□ -0.48
SF1-202ENST00000334944 PPA1Q15181 289 aa12.02□□□□□ -0.48
SF1-202ENST00000334944 AADACL3Q5VUY0 350 aa12.02□□□□□ -0.48
SF1-202ENST00000334944 ZNF880Q6PDB4 577 aa12.02□□□□□ -0.48
SF1-202ENST00000334944 SLC23A3Q6PIS1 610 aa12.02□□□□□ -0.48
SF1-202ENST00000334944 LYPD6BQ8NI32 183 aa12.02□□□□□ -0.48
SF1-202ENST00000334944 M1APQ8TC57 530 aa12.02□□□□□ -0.48
SF1-202ENST00000334944 DYRK2Q92630 601 aa12.02□□□□□ -0.48
SF1-202ENST00000334944 OR10A2Q9H208 303 aa12.02□□□□□ -0.48
SF1-202ENST00000334944 LUZP4Q9P127 313 aa12.02□□□□□ -0.48
SF1-202ENST00000334944 LOXL2Q9Y4K0 774 aa12.02□□□□□ -0.48
SF1-202ENST00000334944 LIPGQ9Y5X9 500 aa12.02□□□□□ -0.48
SF1-202ENST00000334944 IGKV1D-8A0A087WSZ0 117 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 JTBO76095 146 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 RAC1P63000 192 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 BTNL3Q6UXE8 466 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 CT55Q8WUE5 264 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 ARRDC1-AS1Q9H2J1 176 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 RAB18Q9NP72 206 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 TNRC6BQ9UPQ9 1833 aaKnown RBP12.02□□□□□ -0.49
SF1-202ENST00000334944 CNOT1A5YKK6 2376 aaKnown RBP12.02□□□□□ -0.49
SF1-202ENST00000334944 FAM221AA4D161 298 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 DANCRP0C864 163 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 TMEM225BP0DP42 221 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 MMP9P14780 707 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 DUSP3P51452 185 aaPredicted RBP12.02□□□□□ -0.49
SF1-202ENST00000334944 CSNK2A1P68400 391 aaPredicted RBP12.02□□□□□ -0.49
SF1-202ENST00000334944 JOSD1Q15040 202 aaPredicted RBP12.02□□□□□ -0.49
SF1-202ENST00000334944 KCNMB1Q16558 191 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 DCAF12Q5T6F0 453 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 CYB561D1Q8N8Q1 229 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 TMEM54Q969K7 222 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 RAB24Q969Q5 203 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 REEP6Q96HR9 211 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 FAM210BQ96KR6 192 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 SH2D2AQ9NP31 389 aa12.02□□□□□ -0.49
SF1-202ENST00000334944 MAP1BP46821 2468 aaKnown RBP12.02□□□□□ -0.49
SF1-202ENST00000334944 DLEU1O43261 78 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 DHRS3O75911 302 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 LCATP04180 440 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 HPNP05981 417 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 CELA3AP09093 270 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 OR5H8P0DN80 308 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 PAX1P15863 534 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 GDF1P27539 372 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 MAS1LP35410 378 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 SNU13P55769 128 aaKnown RBP12.01□□□□□ -0.49
SF1-202ENST00000334944 CLDN15P56746 228 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 B3GALT5-AS1P59052 145 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 ZNF429Q86V71 674 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 CSNK2A3Q8NEV1 391 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 OR10D3Q8NH80 312 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 LAMA5O15230 3695 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 ELOA3CA0A087WX78 387 aaPredicted RBP12.01□□□□□ -0.49
SF1-202ENST00000334944 FUT3P21217 361 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 RRADP55042 308 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 P4HTMQ9NXG6 502 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 FOXD3Q9UJU5 478 aaPredicted RBP12.01□□□□□ -0.49
SF1-202ENST00000334944 GPR132Q9UNW8 380 aa12.01□□□□□ -0.49
SF1-202ENST00000334944 LOC102725191A0A1B0GVB3 256 aa12□□□□□ -0.49
SF1-202ENST00000334944 SLC33A1O00400 549 aaPredicted RBP12□□□□□ -0.49
SF1-202ENST00000334944 CA11O75493 328 aa12□□□□□ -0.49
SF1-202ENST00000334944 ZNF32P17041 273 aa12□□□□□ -0.49
SF1-202ENST00000334944 CCL1P22362 96 aa12□□□□□ -0.49
SF1-202ENST00000334944 OR3A2P47893 321 aa12□□□□□ -0.49
SF1-202ENST00000334944 MTCP1P56278 107 aa12□□□□□ -0.49
SF1-202ENST00000334944 TAF9Q16594 264 aa12□□□□□ -0.49
SF1-202ENST00000334944 TEX38Q6PEX7 206 aa12□□□□□ -0.49
SF1-202ENST00000334944 ZFP62Q8NB50 900 aaPredicted RBP12□□□□□ -0.49
SF1-202ENST00000334944 OR5H2Q8NGV7 314 aa12□□□□□ -0.49
SF1-202ENST00000334944 PRRX2Q99811 253 aa12□□□□□ -0.49
SF1-202ENST00000334944 RTBDNQ9BSG5 229 aaPredicted RBP12□□□□□ -0.49
SF1-202ENST00000334944 PBDC1Q9BVG4 233 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms