RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 ATXN7O15265 892 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-201ENST00000334504 NDUFB3O43676 98 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 EDIL3O43854 480 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 IGHV3-13P01766 116 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 IGHV3-7P01780 117 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 RELBQ01201 579 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 LRRC10Q5BKY1 277 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 PHOSPHO2Q8TCD6 241 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 R3HDM4Q96D70 268 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 CES1P1Q9UKY3 287 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 VSIG4Q9Y279 399 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 K7ESF4 209 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 DPTQ07507 201 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 C6orf15Q6UXA7 325 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-201ENST00000334504 CD300LDQ6UXZ3 194 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 SLC25A33Q9BSK2 321 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 OR2J1Q9GZK6 312 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 ZNF71Q9NQZ8 489 aaPredicted RBP8.68□□□□□ -1.02
COL4A6-201ENST00000334504 IL36GQ9NZH8 169 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 TIAM2Q8IVF5 1701 aa8.68□□□□□ -1.02
COL4A6-201ENST00000334504 PQLC2LA1A4F0 135 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 MPZL1O95297 269 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 ACP1P24666 158 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 TMEM136Q6ZRR5 245 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 GAPTQ8N292 157 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 OR2V1Q8NHB1 315 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 MRGPRDQ8TDS7 321 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 WDR13Q9H1Z4 485 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 ANXA10Q9UJ72 324 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 FZR1Q9UM11 496 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 PITX3O75364 302 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 KLK2P20151 261 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 TM4SF4P48230 202 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 PMCHL1Q16048 86 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 GFRALQ6UXV0 394 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 CALHM1Q8IU99 346 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 TUSC5Q8IXB3 177 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 WDR31Q8NA23 367 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 RNF133Q8WVZ7 376 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 MRM2Q9UI43 246 aaKnown RBP8.67□□□□□ -1.02
COL4A6-201ENST00000334504 TMSB15BA0A087X1C1 80 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 CTXND1A0A1B0GTU2 59 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 TSPAN13O95857 204 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 NT5CQ8TCD5 201 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 ALG1L2C9J202 215 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 OGG1O15527 345 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 CDX1P47902 265 aaPredicted RBP8.67□□□□□ -1.02
COL4A6-201ENST00000334504 KLRB1Q12918 225 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 ZNF362Q5T0B9 420 aaPredicted RBP8.67□□□□□ -1.02
COL4A6-201ENST00000334504 ZNF774Q6NX45 483 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 THSD4Q6ZMP0 1018 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 OR10S1Q8NGN2 331 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 OR1K1Q8NGR3 316 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 WFIKKN1Q96NZ8 548 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 HCFC2Q9Y5Z7 792 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 SDK1Q7Z5N4 2213 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 BMI1P35226 326 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 ZNF117Q03924 483 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 OR8B3Q8NGG8 313 aa8.67□□□□□ -1.02
COL4A6-201ENST00000334504 F11RQ9Y624 299 aaKnown RBP8.67□□□□□ -1.02
COL4A6-201ENST00000334504 A0A0B4J293 547 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 TRBV5-4A0A0C4DH59 114 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 LMX1BO60663 402 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 ZNF205O95201 554 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 BCL2P10415 239 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 MPLP40238 635 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 WNT5AP41221 380 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 SUMO3P55854 103 aaPredicted RBP8.66□□□□□ -1.02
COL4A6-201ENST00000334504 MICBQ29980 383 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 HES3Q5TGS1 186 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 DCAF12L2Q5VW00 463 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 SLC25A34Q6PIV7 304 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 CCL4L1Q8NHW4 92 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 HIST1H4GQ99525 98 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 UBTD1Q9HAC8 227 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 DNAJB12Q9NXW2 375 aaKnown RBP8.66□□□□□ -1.02
COL4A6-201ENST00000334504 NPBWR2P48146 333 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 HMGA2P52926 109 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 C10orf113Q5VZT2 155 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 OR10AC1Q8NH08 325 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 ZNF707Q96C28 371 aaPredicted RBP8.66□□□□□ -1.02
COL4A6-201ENST00000334504 GSN-AS1Q9NRJ2 163 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 OR2W1Q9Y3N9 320 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 DNPH1O43598 174 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 HIST1H1BP16401 226 aaKnown RBP8.66□□□□□ -1.02
COL4A6-201ENST00000334504 PGFP49763 221 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 ZNF788Q6ZQV5 615 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 ZG16BQ96DA0 208 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 UBR2Q8IWV8 1755 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 WDR25Q64LD2 544 aaPredicted RBP8.66□□□□□ -1.02
COL4A6-201ENST00000334504 OR4C3Q8NH37 302 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 FRRS1LQ9P0K9 344 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 R4GN57 208 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 LRP6O75581 1613 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 COX6CP09669 75 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 ZNF506Q5JVG8 444 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 PARM1Q6UWI2 310 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 EID2BQ96D98 161 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 CCL28Q9NRJ3 127 aa8.66□□□□□ -1.02
COL4A6-201ENST00000334504 MYF5P13349 255 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms