RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 Q9N2K0 584 aa16.19■□□□□ 0.18
RFTN1-201ENST00000334133 CCL28Q9NRJ3 127 aa16.19■□□□□ 0.18
RFTN1-201ENST00000334133 RCL1Q9Y2P8 373 aaKnown RBP16.19■□□□□ 0.18
RFTN1-201ENST00000334133 UBE2J1Q9Y385 318 aaPredicted RBP16.19■□□□□ 0.18
RFTN1-201ENST00000334133 CACNA1DQ01668 2161 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 ZNF724A8MTY0 619 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 CST4P01036 141 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 CD46P15529 392 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 Q6ZRG5 221 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 HSD17B11Q8NBQ5 300 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 IL1F10Q8WWZ1 152 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 FER1L6-AS2Q96M78 137 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 SUCNR1Q9BXA5 334 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 SH3BGRL3Q9H299 93 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 MMP26Q9NRE1 261 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 OTOGLQ3ZCN5 2332 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 TRGV5A0A0B4J1U4 118 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 SLC22A20A6NK97 555 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 ATP6V1G2-DDX39BF2Z307 99 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 NKX2-8O15522 239 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 ARR3P36575 388 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 PJVKQ0ZLH3 352 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 ZNF766Q5HY98 468 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 LDLRAD3Q86YD5 345 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 SUMF2Q8NBJ7 301 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 USB1Q9BQ65 265 aaKnown RBP16.18■□□□□ 0.18
RFTN1-201ENST00000334133 RSRP1Q9BUV0 290 aa16.18■□□□□ 0.18
RFTN1-201ENST00000334133 ANKRD30BLA7E2S9 258 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 TK1P04183 234 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 OR8U9P0C7N5 309 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 RNPS1Q15287 305 aaKnown RBP16.17■□□□□ 0.18
RFTN1-201ENST00000334133 DPPA2Q7Z7J5 298 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 ZNF565Q8N9K5 539 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 OR8U1Q8NH10 309 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 WDYHV1Q96HA8 205 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 TMEM9BQ9NQ34 198 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 CACNA1GO43497 2377 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 C9JQL5 133 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 H7C1Q1 480 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 LYZL6O75951 148 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 CD80P33681 288 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 ALKBH6Q3KRA9 238 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 OR5P3Q8WZ94 311 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 UQCC1Q9NVA1 299 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 TOR1AO14656 332 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 ZNF44P15621 663 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 IDH3GP51553 393 aaPredicted RBP16.17■□□□□ 0.18
RFTN1-201ENST00000334133 CCL11P51671 97 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 POLR2GP62487 172 aaKnown RBP eCLIP16.17■□□□□ 0.18
RFTN1-201ENST00000334133 UQCC3Q6UW78 93 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 ZFP62Q8NB50 900 aaPredicted RBP16.17■□□□□ 0.18
RFTN1-201ENST00000334133 OR1K1Q8NGR3 316 aa16.17■□□□□ 0.18
RFTN1-201ENST00000334133 RIF1Q5UIP0 2472 aaKnown RBP16.16■□□□□ 0.18
RFTN1-201ENST00000334133 E5RGE8 158 aa16.16■□□□□ 0.18
RFTN1-201ENST00000334133 NAPSAO96009 420 aa16.16■□□□□ 0.18
RFTN1-201ENST00000334133 NPBWR1P48145 328 aa16.16■□□□□ 0.18
RFTN1-201ENST00000334133 CLINT1Q14677 625 aa16.16■□□□□ 0.18
RFTN1-201ENST00000334133 FBXO9Q9UK97 447 aaPredicted RBP16.16■□□□□ 0.18
RFTN1-201ENST00000334133 NSG2Q9Y328 171 aa16.16■□□□□ 0.18
RFTN1-201ENST00000334133 TNRC6AQ8NDV7 1962 aaKnown RBP16.16■□□□□ 0.18
RFTN1-201ENST00000334133 CEP250Q9BV73 2442 aa16.16■□□□□ 0.18
RFTN1-201ENST00000334133 FAM24AA6NFZ4 105 aa16.16■□□□□ 0.18
RFTN1-201ENST00000334133 TAAR5O14804 337 aa16.16■□□□□ 0.18
RFTN1-201ENST00000334133 NFYBP25208 207 aa16.16■□□□□ 0.18
RFTN1-201ENST00000334133 CAV2P51636 162 aa16.16■□□□□ 0.18
RFTN1-201ENST00000334133 ZNF616Q08AN1 781 aa16.16■□□□□ 0.18
RFTN1-201ENST00000334133 FBXW9Q5XUX1 488 aa16.16■□□□□ 0.18
RFTN1-201ENST00000334133 ZNF695Q8IW36 515 aa16.16■□□□□ 0.18
RFTN1-201ENST00000334133 CCDC71LQ8N9Z2 235 aa16.16■□□□□ 0.18
RFTN1-201ENST00000334133 SMIM8Q96KF7 97 aa16.16■□□□□ 0.18
RFTN1-201ENST00000334133 ATPIF1Q9UII2 106 aa16.16■□□□□ 0.18
RFTN1-201ENST00000334133 ST8SIA3O43173 380 aa16.15■□□□□ 0.18
RFTN1-201ENST00000334133 TRIP6Q15654 476 aaKnown RBP16.15■□□□□ 0.18
RFTN1-201ENST00000334133 IZUMO4Q1ZYL8 232 aa16.15■□□□□ 0.18
RFTN1-201ENST00000334133 CXorf66Q5JRM2 361 aaPredicted RBP16.15■□□□□ 0.18
RFTN1-201ENST00000334133 OR5A2Q8NGI9 324 aa16.15■□□□□ 0.18
RFTN1-201ENST00000334133 JTBO76095 146 aa16.15■□□□□ 0.18
RFTN1-201ENST00000334133 GLAP06280 429 aa16.15■□□□□ 0.18
RFTN1-201ENST00000334133 DMBX1Q8NFW5 382 aa16.15■□□□□ 0.18
RFTN1-201ENST00000334133 OR2J1Q9GZK6 312 aa16.15■□□□□ 0.18
RFTN1-201ENST00000334133 SPTBN2O15020 2390 aa16.14■□□□□ 0.18
RFTN1-201ENST00000334133 TRAV24A0A0B4J272 114 aa16.14■□□□□ 0.17
RFTN1-201ENST00000334133 SULT1A2P50226 295 aa16.14■□□□□ 0.17
RFTN1-201ENST00000334133 SWI5Q1ZZU3 235 aa16.14■□□□□ 0.17
RFTN1-201ENST00000334133 P4HA3Q7Z4N8 544 aa16.14■□□□□ 0.17
RFTN1-201ENST00000334133 SVBPQ8N300 66 aa16.14■□□□□ 0.17
RFTN1-201ENST00000334133 BCL2L2Q92843 193 aaPredicted RBP16.14■□□□□ 0.17
RFTN1-201ENST00000334133 FAM86C1Q9NVL1 165 aa16.14■□□□□ 0.17
RFTN1-201ENST00000334133 GVINP1Q7Z2Y8 2422 aa16.14■□□□□ 0.17
RFTN1-201ENST00000334133 SPAARA0A1B0GVQ0 90 aa16.14■□□□□ 0.17
RFTN1-201ENST00000334133 ADAM20O43506 726 aa16.14■□□□□ 0.17
RFTN1-201ENST00000334133 SS18L1O75177 396 aaPredicted RBP16.14■□□□□ 0.17
RFTN1-201ENST00000334133 COX5BP10606 129 aa16.14■□□□□ 0.17
RFTN1-201ENST00000334133 EIF5AL1Q6IS14 154 aaKnown RBP16.14■□□□□ 0.17
RFTN1-201ENST00000334133 Q8NFD4 153 aa16.14■□□□□ 0.17
RFTN1-201ENST00000334133 OR51H1Q8NH63 302 aa16.14■□□□□ 0.17
RFTN1-201ENST00000334133 TMEM222Q9H0R3 208 aa16.14■□□□□ 0.17
RFTN1-201ENST00000334133 SIRPB1O00241 398 aa16.14■□□□□ 0.17
RFTN1-201ENST00000334133 TPD52L2O43399 206 aaKnown RBP16.14■□□□□ 0.17
RFTN1-201ENST00000334133 SSSCA1O60232 199 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms