RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 NCOR1P1Q9H4R4 102 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 SPACA1Q9HBV2 294 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 TAS2R3Q9NYW6 316 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 OR6C3Q9NZP0 311 aa11.45□□□□□ -0.58
LIMS1-201ENST00000332345 ODAMA1E959 279 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 MEX3AA1L020 520 aaKnown RBP11.44□□□□□ -0.58
LIMS1-201ENST00000332345 HSPB6O14558 160 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 GEMIN2O14893 280 aaKnown RBP11.44□□□□□ -0.58
LIMS1-201ENST00000332345 HOXA3O43365 443 aaPredicted RBP11.44□□□□□ -0.58
LIMS1-201ENST00000332345 CRTAPO75718 401 aaPredicted RBP11.44□□□□□ -0.58
LIMS1-201ENST00000332345 IGHV1-8P0DP01 117 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 SAA4P35542 130 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 PSMD7P51665 324 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 FABP5Q01469 135 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 ATXN7L3Q14CW9 347 aaPredicted RBP11.44□□□□□ -0.58
LIMS1-201ENST00000332345 UBE2UQ5VVX9 321 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 DMRTA1Q5VZB9 504 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 HCP5Q6MZN7 132 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 ZNF773Q6PK81 442 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 PNKDQ8N490 385 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 TMEM86BQ8N661 226 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 SUMF2Q8NBJ7 301 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 SSMEM1Q8WWF3 244 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 DUX5Q96PT3 197 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 DPCDQ9BVM2 203 aaPredicted RBP11.44□□□□□ -0.58
LIMS1-201ENST00000332345 DPAGT1Q9H3H5 408 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 ING3Q9NXR8 418 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 POMT1Q9Y6A1 747 aa11.44□□□□□ -0.58
LIMS1-201ENST00000332345 A0A1W2PP11 408 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 CCRL2O00421 344 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 RNASE1P07998 156 aaKnown RBP11.43□□□□□ -0.58
LIMS1-201ENST00000332345 MELTFP08582 738 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 CD37P11049 281 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 CALRP27797 417 aaKnown RBP11.43□□□□□ -0.58
LIMS1-201ENST00000332345 ACTG1P63261 375 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 SSX1Q16384 188 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 TAF9Q16594 264 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 C1orf100Q5SVJ3 147 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 ATAD3CQ5T2N8 411 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 OR52W1Q6IF63 320 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 C16orf87Q6PH81 154 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 ZNF782Q6ZMW2 699 aaPredicted RBP11.43□□□□□ -0.58
LIMS1-201ENST00000332345 LDLRAD3Q86YD5 345 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.43□□□□□ -0.58
LIMS1-201ENST00000332345 GCDHQ92947 438 aaPredicted RBP11.43□□□□□ -0.58
LIMS1-201ENST00000332345 COQ2Q96H96 371 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 C1orf147Q96MC9 270 aaPredicted RBP11.43□□□□□ -0.58
LIMS1-201ENST00000332345 SELENOIQ9C0D9 397 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 CST11Q9H112 138 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 BANF2Q9H503 90 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 NDUFB11Q9NX14 153 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 SESN1Q9Y6P5 492 aa11.43□□□□□ -0.58
LIMS1-201ENST00000332345 MEIKINA0A087WXM9 373 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 FAM90A10PA6NDY2 464 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 FAM90A18PA6NE21 464 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 FAM90A16PA6NEW6 464 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 FAM90A20PA6NIJ5 464 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 FAM90A8PA6NJQ4 464 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 FAM90A7PA6NKC0 464 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 FAM90A22PA8MWA6 464 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 FAM90A12PA8MX19 464 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 FAM90A5PA8MXJ8 464 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 FAM90A23PA8MXZ1 464 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 MCRIP1C9JLW8 97 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 FAM90A15PP0C7V4 464 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 FAM90A13PP0C7W8 464 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 FAM90A14PP0C7W9 464 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 FAM90A24PP0C7X0 464 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 MGMTP16455 207 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 GALP22466 123 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 COX7A1P24310 79 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 PSMB9P28065 219 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 HTR2CP28335 458 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 IER3P46695 156 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 PAX5Q02548 391 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 RBM39Q14498 530 aaKnown RBP11.42□□□□□ -0.58
LIMS1-201ENST00000332345 KCTD21Q4G0X4 260 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 HEPN1Q6WQI6 88 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 TCF23Q7RTU1 214 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 OR6M1Q8NGM8 313 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 KCNG3Q8TAE7 436 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 PLGRKTQ9HBL7 147 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 KIF25Q9UIL4 384 aa11.42□□□□□ -0.58
LIMS1-201ENST00000332345 TRDV1A0A1B0GX56 115 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 BTBD17A6NE02 478 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 ZNF729A6NN14 1252 aaPredicted RBP11.41□□□□□ -0.58
LIMS1-201ENST00000332345 PDCD5O14737 125 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 SLC22A1O15245 554 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 CLPXO76031 633 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 ARG1P05089 322 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 CRYBA1P05813 215 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 GLAP06280 429 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 GZMHP20718 246 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 FUT3P21217 361 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 CDK2P24941 298 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 DYNC1I2Q13409 638 aaKnown RBP11.41□□□□□ -0.58
LIMS1-201ENST00000332345 SLC35E4Q6ICL7 350 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 CD200R1LQ6Q8B3 271 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 BEND2Q8NDZ0 799 aa11.41□□□□□ -0.58
LIMS1-201ENST00000332345 TMEM104Q8NE00 496 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms