RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 HIST1H2BLQ99880 126 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 ZFP92A6NM28 416 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 CD38P28907 300 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 CNN3Q15417 329 aaKnown RBP12.48□□□□□ -0.41
SNX20-202ENST00000330943 Q6ZSR3 168 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 LILRB2Q8N423 598 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 IL22RA1Q8N6P7 574 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 ZNF442Q9H7R0 627 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 AHCTF1Q8WYP5 2266 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 LOC102723971A0A1B0GUV8 181 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 IFNA10P01566 189 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 NR2C1P13056 603 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 IL2RGP31785 369 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 TAS2R60P59551 318 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 RAB30Q15771 203 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 PRAMEF20Q5VT98 475 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 PLXDC1Q8IUK5 500 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 RNF138Q8WVD3 245 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 NAT6Q93015 286 aa12.48□□□□□ -0.41
SNX20-202ENST00000330943 ZNF501Q96CX3 271 aaPredicted RBP12.48□□□□□ -0.41
SNX20-202ENST00000330943 TTC28Q96AY4 2481 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 B4DEV8 164 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 CLDN34H7C241 214 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 IGLV3-19P01714 112 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 GNRHRP30968 328 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 CD81P60033 236 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 MALLQ13021 153 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 DNLZQ5SXM8 178 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 C5orf24Q7Z6I8 188 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 SELENOHQ8IZQ5 122 aaKnown RBP12.47□□□□□ -0.41
SNX20-202ENST00000330943 LAMA5O15230 3695 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 KNTC1P50748 2209 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 A0A087WZY1 265 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 DHHO43323 396 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 MPV17LQ2QL34 196 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 C10orf128Q5T292 105 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 FAM90A2PQ658T7 463 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 SLC25A24Q6NUK1 477 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 STX12Q86Y82 276 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 ZNF837Q96EG3 531 aaPredicted RBP12.47□□□□□ -0.41
SNX20-202ENST00000330943 SSX3Q99909 188 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 SLC7A10Q9NS82 523 aa12.47□□□□□ -0.41
SNX20-202ENST00000330943 MAP1BP46821 2468 aaKnown RBP12.46□□□□□ -0.41
SNX20-202ENST00000330943 LMO7DNF2Z398 122 aa12.46□□□□□ -0.41
SNX20-202ENST00000330943 H3BP45 60 aa12.46□□□□□ -0.41
SNX20-202ENST00000330943 PHOX2AO14813 284 aa12.46□□□□□ -0.41
SNX20-202ENST00000330943 PDCD6O75340 191 aa12.46□□□□□ -0.41
SNX20-202ENST00000330943 ZNF880Q6PDB4 577 aa12.46□□□□□ -0.41
SNX20-202ENST00000330943 THNSL2Q86YJ6 484 aa12.46□□□□□ -0.41
SNX20-202ENST00000330943 P4HTMQ9NXG6 502 aa12.46□□□□□ -0.41
SNX20-202ENST00000330943 CFAP47Q6ZTR5 3102 aa12.46□□□□□ -0.42
SNX20-202ENST00000330943 IGLV3-32A0A0A0MS00 114 aa12.46□□□□□ -0.42
SNX20-202ENST00000330943 TERTO14746 1132 aaKnown RBP12.46□□□□□ -0.42
SNX20-202ENST00000330943 TNFSF12O43508 249 aa12.46□□□□□ -0.42
SNX20-202ENST00000330943 DUX1O43812 170 aa12.46□□□□□ -0.42
SNX20-202ENST00000330943 CHST1O43916 411 aa12.46□□□□□ -0.42
SNX20-202ENST00000330943 OR7C1O76099 320 aaPredicted RBP12.46□□□□□ -0.42
SNX20-202ENST00000330943 TCN2P20062 427 aa12.46□□□□□ -0.42
SNX20-202ENST00000330943 HIST1H3AP68431 136 aa12.46□□□□□ -0.42
SNX20-202ENST00000330943 SSX2Q16385 188 aa12.46□□□□□ -0.42
SNX20-202ENST00000330943 ZNF385CQ66K41 422 aaPredicted RBP12.46□□□□□ -0.42
SNX20-202ENST00000330943 LHFPL2Q6ZUX7 228 aa12.46□□□□□ -0.42
SNX20-202ENST00000330943 TMEM56Q96MV1 263 aa12.46□□□□□ -0.42
SNX20-202ENST00000330943 ATP5SQ99766 215 aa12.46□□□□□ -0.42
SNX20-202ENST00000330943 MYOTQ9UBF9 498 aa12.46□□□□□ -0.42
SNX20-202ENST00000330943 MTCH2Q9Y6C9 303 aa12.46□□□□□ -0.42
SNX20-202ENST00000330943 TMEM56-RWDD3S4R434 201 aa12.46□□□□□ -0.42
SNX20-202ENST00000330943 A0A1B0GU03 582 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 NPIPA2E9PIF3 369 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 NPIPA3F8WFD2 350 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 CYB5R3P00387 301 aaPredicted RBP12.45□□□□□ -0.42
SNX20-202ENST00000330943 LCATP04180 440 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 TAS2R30P59541 319 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 BAXQ07812 192 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 OR5L2Q8NGL0 311 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 MISP3Q96FF7 219 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 SIGLEC12Q96PQ1 595 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 UCN2Q96RP3 112 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 ULBP2Q9BZM5 246 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 ZNF665Q9H7R5 613 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 LOC102725191A0A1B0GVB3 256 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 ARGFXA6NJG6 315 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 NRASP01111 189 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 HLA-HP01893 362 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 CEACAM1P13688 526 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 RND2P52198 227 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 ZNF124Q15973 351 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 ZNF818PQ6ZRF7 136 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 FAM185AQ8N0U4 392 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 OR5R1Q8NH85 324 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 TMEM54Q969K7 222 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 CABLES2Q9BTV7 478 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 LRFN1Q9P244 771 aa12.45□□□□□ -0.42
SNX20-202ENST00000330943 C9J4A7 227 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 USF2Q15853 346 aaPredicted RBP12.44□□□□□ -0.42
SNX20-202ENST00000330943 EXT1Q16394 746 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 LCN15Q6UWW0 184 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 GAPTQ8N292 157 aa12.44□□□□□ -0.42
SNX20-202ENST00000330943 PITPNC1Q9UKF7 332 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms