RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 ESRP2Q9H6T0 727 aaKnown RBP12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 ZNF391Q9UJN7 358 aa12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 PRRC2CQ9Y520 2896 aaKnown RBP12.08□□□□□ -0.48
ATP2C1-201ENST00000328560 DANCRP0C864 163 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 SNCAP37840 140 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 ZNF528Q3MIS6 628 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 PRR18Q8N4B5 295 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 OR2C3Q8N628 320 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 UBALD1Q8TB05 177 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 IL1F10Q8WWZ1 152 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 ABHD14AQ9BUJ0 271 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 CCL28Q9NRJ3 127 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 FAM86C1Q9NVL1 165 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 CACFD1Q9UGQ2 172 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 TMED3Q9Y3Q3 217 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 KPTNQ9Y664 436 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 TRAV39A0A0B4J263 110 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 TRAPPC2LH3BP13 241 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 SYNGR1O43759 233 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 SEC11BP0C7V7 166 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 TDGF1P13385 188 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 MAGEA5P43359 124 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 IL13RA2Q14627 380 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 GPR157Q5UAW9 335 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 PEAR1Q5VY43 1037 aaPredicted RBP12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 C17orf78Q8N4C9 275 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 OR2G3Q8NGZ4 309 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 FRYQ5TBA9 3013 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 IGKV1D-13A0A0B4J2D9 117 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 ZNF98A6NK75 572 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 WRBO00258 174 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 ARG1P05089 322 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 IGKV1-13P0DP09 117 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 ZNF818PQ6ZRF7 136 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 MKXQ8IYA7 352 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 RNASE11Q8TAA1 199 aaKnown RBP12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 C12orf49Q9H741 205 aa12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 PUS1Q9Y606 427 aaKnown RBP eCLIP12.07□□□□□ -0.48
ATP2C1-201ENST00000328560 C7orf77A4D0Y5 90 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 ZNF503-AS2A6NEH8 195 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 UMAD1C9J7I0 102 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 H3BP45 60 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 RPL36A-HNRNPH2H7BZ11 118 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 SNRPEP62304 92 aaKnown RBP12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 RAB1AP62820 205 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 SPATA46Q5T0L3 261 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 OR51H1Q8NH63 302 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 PSMF1Q92530 271 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 RSRP1Q9BUV0 290 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 C1QTNF5Q9BXJ0 243 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 ZNF552Q9H707 407 aaPredicted RBP12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 KCNJ16Q9NPI9 418 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 COLCA2A8K830 154 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 S100A6P06703 90 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 GFRA1P56159 465 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 FOXO1Q12778 655 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 FAM180AQ6UWF9 173 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 ZDHHC23Q8IYP9 409 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 HPSE2Q8WWQ2 592 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 FAM173AQ9BQD7 235 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 BCL2L14Q9BZR8 327 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 FGF23Q9GZV9 251 aaPredicted RBP12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 MTCH1Q9NZJ7 389 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 POMT1Q9Y6A1 747 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 A6NLC8 198 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 ZNF100Q8IYN0 542 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 USB1Q9BQ65 265 aaKnown RBP12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 TMEM222Q9H0R3 208 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 IL36GQ9NZH8 169 aa12.06□□□□□ -0.48
ATP2C1-201ENST00000328560 IGSF23A1L1A6 192 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 TRDCB7Z8K6 153 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 RAB5BP61020 215 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 DAZAP2Q15038 168 aaPredicted RBP12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 IZUMO4Q1ZYL8 232 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 LRTM2Q8N967 370 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 OR2M7Q8NG81 312 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 RARRES2Q99969 163 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 GINS3Q9BRX5 216 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 A0A1W2PPH5 198 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 P4HA3Q7Z4N8 544 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 OR5C1Q8NGR4 320 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 NTNG2Q96CW9 530 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 BOD1Q96IK1 185 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 PRDM14Q9GZV8 571 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 C1orf196B1AJZ1 125 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 ATP6V0CP27449 155 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 UCP3P55916 312 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 RUNX1Q01196 453 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 PLP2Q04941 152 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 OR4D5Q8NGN0 318 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 REPIN1Q9BWE0 567 aaKnown RBP12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 Q9N2K0 584 aa12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 RBM7Q9Y580 266 aaKnown RBP12.05□□□□□ -0.48
ATP2C1-201ENST00000328560 hCG_1809904A0A1W2PP81 198 aa12.04□□□□□ -0.48
ATP2C1-201ENST00000328560 A0A1W2PR64 198 aa12.04□□□□□ -0.48
ATP2C1-201ENST00000328560 A0A1W2PRV1 198 aa12.04□□□□□ -0.48
ATP2C1-201ENST00000328560 FAM157AC9JC47 383 aa12.04□□□□□ -0.48
ATP2C1-201ENST00000328560 LILRA1O75019 489 aa12.04□□□□□ -0.48
ATP2C1-201ENST00000328560 HOXA1P49639 335 aaPredicted RBP12.04□□□□□ -0.48
ATP2C1-201ENST00000328560 CTAG1AP78358 180 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms