RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 SLC35G3Q8N808 338 aa18.28■□□□□ 0.52
LIMS2-201ENST00000324938 DEFB124Q8NES8 71 aa18.28■□□□□ 0.52
LIMS2-201ENST00000324938 MRPL30Q8TCC3 161 aaKnown RBP18.28■□□□□ 0.52
LIMS2-201ENST00000324938 LRRC46Q96FV0 321 aa18.28■□□□□ 0.52
LIMS2-201ENST00000324938 J3QT63 122 aa18.27■□□□□ 0.52
LIMS2-201ENST00000324938 SIGLEC5O15389 551 aa18.27■□□□□ 0.52
LIMS2-201ENST00000324938 NKX2-8O15522 239 aa18.27■□□□□ 0.52
LIMS2-201ENST00000324938 GLAP06280 429 aa18.27■□□□□ 0.52
LIMS2-201ENST00000324938 SPATA46Q5T0L3 261 aa18.27■□□□□ 0.52
LIMS2-201ENST00000324938 MYPOPQ86VE0 399 aaPredicted RBP18.27■□□□□ 0.52
LIMS2-201ENST00000324938 OR52M1Q8NGK5 317 aa18.27■□□□□ 0.52
LIMS2-201ENST00000324938 IFT22Q9H7X7 185 aa18.27■□□□□ 0.52
LIMS2-201ENST00000324938 TMEM218A2RU14 115 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 GPR31O00270 319 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 TBC1D26Q86UD7 250 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 ZNF565Q8N9K5 539 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 SECTM1Q8WVN6 248 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 RHOFQ9HBH0 211 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 PARD6AQ9NPB6 346 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 ASCL3Q9NQ33 180 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 CACNA1HO95180 2353 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 TRAV24A0A0B4J272 114 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 IGKV1-6A0A0C4DH72 117 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 SMPD2O60906 423 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 IGHV1-2P23083 117 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 IL32P24001 234 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 SULT1A2P50226 295 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 TGFBR3Q03167 851 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 SRSF6Q13247 344 aaKnown RBP18.26■□□□□ 0.51
LIMS2-201ENST00000324938 ZNF273Q14593 569 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 PXDC1Q5TGL8 231 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 MEX3BQ6ZN04 569 aaKnown RBP18.26■□□□□ 0.51
LIMS2-201ENST00000324938 UBAC2Q8NBM4 344 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 OR4D5Q8NGN0 318 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 OR4A4PQ8NGN8 299 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 TMEM56Q96MV1 263 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 TMEM56-RWDD3S4R434 201 aa18.26■□□□□ 0.51
LIMS2-201ENST00000324938 ST8SIA3O43173 380 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 SLC34A2O95436 690 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 CELA3BP08861 270 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 SPINK2P20155 84 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 DEFA5Q01523 94 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 ZNF880Q6PDB4 577 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 ZNF818PQ6ZRF7 136 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 C17orf78Q8N4C9 275 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 FDCSPQ8NFU4 85 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 ERGIC1Q969X5 290 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 RTL8AQ9BWD3 113 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 IGKV1D-13A0A0B4J2D9 117 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 GPR137BO60478 399 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 RHBDL1O75783 438 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 CDS2O95674 445 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 IGKV1-13P0DP09 117 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 P2RY1P47900 373 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 CCL11P51671 97 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 PJVKQ0ZLH3 352 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 MRPL49Q13405 166 aaKnown RBP18.25■□□□□ 0.51
LIMS2-201ENST00000324938 SPIN3Q5JUX0 258 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 GPR157Q5UAW9 335 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 IGFL2Q6UWQ7 119 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 USB1Q9BQ65 265 aaKnown RBP18.25■□□□□ 0.51
LIMS2-201ENST00000324938 SMIM3Q9BZL3 60 aa18.25■□□□□ 0.51
LIMS2-201ENST00000324938 SPAARA0A1B0GVQ0 90 aa18.24■□□□□ 0.51
LIMS2-201ENST00000324938 ABCD4O14678 606 aa18.24■□□□□ 0.51
LIMS2-201ENST00000324938 TSPAN4O14817 238 aa18.24■□□□□ 0.51
LIMS2-201ENST00000324938 NOVA1P51513 510 aaKnown RBP18.24■□□□□ 0.51
LIMS2-201ENST00000324938 UBE2NP61088 152 aaKnown RBP18.24■□□□□ 0.51
LIMS2-201ENST00000324938 PPP1CBP62140 327 aa18.24■□□□□ 0.51
LIMS2-201ENST00000324938 C20orf204Q6ZNR8 217 aa18.24■□□□□ 0.51
LIMS2-201ENST00000324938 GAPTQ8N292 157 aa18.24■□□□□ 0.51
LIMS2-201ENST00000324938 RDH5Q92781 318 aa18.24■□□□□ 0.51
LIMS2-201ENST00000324938 ARV1Q9H2C2 271 aa18.24■□□□□ 0.51
LIMS2-201ENST00000324938 CDH20Q9HBT6 801 aa18.24■□□□□ 0.51
LIMS2-201ENST00000324938 DLL3Q9NYJ7 618 aa18.24■□□□□ 0.51
LIMS2-201ENST00000324938 ZDHHC8Q9ULC8 765 aa18.24■□□□□ 0.51
LIMS2-201ENST00000324938 UBE2J1Q9Y385 318 aaPredicted RBP18.24■□□□□ 0.51
LIMS2-201ENST00000324938 POMT1Q9Y6A1 747 aa18.24■□□□□ 0.51
LIMS2-201ENST00000324938 OTOGLQ3ZCN5 2332 aa18.24■□□□□ 0.51
LIMS2-201ENST00000324938 HS3ST1O14792 307 aa18.23■□□□□ 0.51
LIMS2-201ENST00000324938 ATG12O94817 140 aa18.23■□□□□ 0.51
LIMS2-201ENST00000324938 AKR1C2P52895 323 aa18.23■□□□□ 0.51
LIMS2-201ENST00000324938 AKR1C1Q04828 323 aa18.23■□□□□ 0.51
LIMS2-201ENST00000324938 GUSBP1Q15486 140 aa18.23■□□□□ 0.51
LIMS2-201ENST00000324938 LRP5LA4QPB2 252 aa18.23■□□□□ 0.51
LIMS2-201ENST00000324938 MED6O75586 246 aa18.23■□□□□ 0.51
LIMS2-201ENST00000324938 LPAR6P43657 344 aa18.23■□□□□ 0.51
LIMS2-201ENST00000324938 IDH3GP51553 393 aaPredicted RBP18.23■□□□□ 0.51
LIMS2-201ENST00000324938 PCSK4Q6UW60 755 aa18.23■□□□□ 0.51
LIMS2-201ENST00000324938 FAM214BQ7L5A3 538 aa18.23■□□□□ 0.51
LIMS2-201ENST00000324938 WDR86Q86TI4 376 aa18.23■□□□□ 0.51
LIMS2-201ENST00000324938 GCNT2Q8N0V5 402 aa18.23■□□□□ 0.51
LIMS2-201ENST00000324938 DMBX1Q8NFW5 382 aa18.23■□□□□ 0.51
LIMS2-201ENST00000324938 RCL1Q9Y2P8 373 aaKnown RBP18.23■□□□□ 0.51
LIMS2-201ENST00000324938 ADCYAP1P18509 176 aa18.22■□□□□ 0.51
LIMS2-201ENST00000324938 HLA-DRB3P79483 266 aa18.22■□□□□ 0.51
LIMS2-201ENST00000324938 FAM76BQ5HYJ3 339 aa18.22■□□□□ 0.51
LIMS2-201ENST00000324938 Q6P435 159 aa18.22■□□□□ 0.51
LIMS2-201ENST00000324938 TRIB1Q96RU8 372 aa18.22■□□□□ 0.51
LIMS2-201ENST00000324938 NKX6-2Q9C056 277 aaPredicted RBP18.22■□□□□ 0.51
LIMS2-201ENST00000324938 OR2J1Q9GZK6 312 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms