RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SCTP09683 121 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 MUC1P15941 1255 aaPredicted RBP19.13■□□□□ 0.65
PNKP-201ENST00000322344 CTRB1P17538 263 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 IL24Q13007 206 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 CTRB2Q6GPI1 263 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 HAGHLQ6PII5 290 aaPredicted RBP19.13■□□□□ 0.65
PNKP-201ENST00000322344 Q6ZRG5 221 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.13■□□□□ 0.65
PNKP-201ENST00000322344 LYPD6BQ8NI32 183 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 WDYHV1Q96HA8 205 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 ABHD14BQ96IU4 210 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 TMEM231Q9H6L2 316 aa19.13■□□□□ 0.65
PNKP-201ENST00000322344 RNASEK-C17orf49H0YIS7 233 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 ZNHIT1O43257 154 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 IL18BPO95998 194 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 WNT5AP41221 380 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 SPIN3Q5JUX0 258 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 ZNF695Q8IW36 515 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 SECTM1Q8WVN6 248 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 PLA2G2EQ9NZK7 142 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 J3QW42 95 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 SLC34A2O95436 690 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 CD5P06127 495 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 COMMD1Q8N668 190 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 SUMF2Q8NBJ7 301 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 DMBX1Q8NFW5 382 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 C12orf49Q9H741 205 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 IL36RNQ9UBH0 155 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 ZDHHC8Q9ULC8 765 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 ZNF175Q9Y473 711 aa19.12■□□□□ 0.65
PNKP-201ENST00000322344 TRGV5A0A0B4J1U4 118 aa19.11■□□□□ 0.65
PNKP-201ENST00000322344 SLC22A20A6NK97 555 aa19.11■□□□□ 0.65
PNKP-201ENST00000322344 HIKESHIQ53FT3 197 aa19.11■□□□□ 0.65
PNKP-201ENST00000322344 DEFB127Q9H1M4 99 aa19.11■□□□□ 0.65
PNKP-201ENST00000322344 FAM96BQ9Y3D0 163 aa19.11■□□□□ 0.65
PNKP-201ENST00000322344 H2AFB1P0C5Y9 115 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 PVALBP20472 110 aaPredicted RBP19.1■□□□□ 0.65
PNKP-201ENST00000322344 RAB5CP51148 216 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 DVL1P1P54792 670 aaPredicted RBP19.1■□□□□ 0.65
PNKP-201ENST00000322344 HERPUD1Q15011 391 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 TSC22D1Q15714 1073 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 DHRS7BQ6IAN0 325 aaPredicted RBP19.1■□□□□ 0.65
PNKP-201ENST00000322344 ZNF818PQ6ZRF7 136 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 SELENOHQ8IZQ5 122 aaKnown RBP19.1■□□□□ 0.65
PNKP-201ENST00000322344 TMEM178AQ8NBL3 297 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 MRPL30Q8TCC3 161 aaKnown RBP19.1■□□□□ 0.65
PNKP-201ENST00000322344 BSCL2Q96G97 398 aaPredicted RBP19.1■□□□□ 0.65
PNKP-201ENST00000322344 USB1Q9BQ65 265 aaKnown RBP19.1■□□□□ 0.65
PNKP-201ENST00000322344 IFT22Q9H7X7 185 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 TMEM9BQ9NQ34 198 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 NKX2-6A6NCS4 301 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 SPP1P10451 314 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 ZNF766Q5HY98 468 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 CMTM1Q8IZ96 169 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 FAM58AQ8N1B3 248 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 GAPTQ8N292 157 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 AIFM2Q9BRQ8 373 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 WFDC1Q9HC57 220 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 LUZP4Q9P127 313 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 NDRG3Q9UGV2 375 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 LHX6Q9UPM6 363 aa19.1■□□□□ 0.65
PNKP-201ENST00000322344 PIGBOS1A0A0B4J2F0 54 aa19.09■□□□□ 0.65
PNKP-201ENST00000322344 ATP6V1G2-DDX39BF2Z307 99 aa19.09■□□□□ 0.65
PNKP-201ENST00000322344 DANCRP0C864 163 aa19.09■□□□□ 0.65
PNKP-201ENST00000322344 UCP1P25874 307 aa19.09■□□□□ 0.65
PNKP-201ENST00000322344 NKX2-1P43699 371 aaPredicted RBP19.09■□□□□ 0.65
PNKP-201ENST00000322344 ARG2P78540 354 aa19.09■□□□□ 0.65
PNKP-201ENST00000322344 MDP1Q86V88 176 aa19.09■□□□□ 0.65
PNKP-201ENST00000322344 IL22RA2Q969J5 263 aa19.09■□□□□ 0.65
PNKP-201ENST00000322344 C11orf1Q9H5F2 150 aa19.09■□□□□ 0.65
PNKP-201ENST00000322344 STRAPQ9Y3F4 350 aaKnown RBP19.09■□□□□ 0.65
PNKP-201ENST00000322344 CLEC18AA5D8T8 446 aa19.08■□□□□ 0.65
PNKP-201ENST00000322344 J3QT63 122 aa19.08■□□□□ 0.65
PNKP-201ENST00000322344 TBC1D28Q2M2D7 210 aa19.08■□□□□ 0.65
PNKP-201ENST00000322344 ZNF880Q6PDB4 577 aa19.08■□□□□ 0.65
PNKP-201ENST00000322344 CLEC18CQ8NCF0 446 aa19.08■□□□□ 0.65
PNKP-201ENST00000322344 BOD1Q96IK1 185 aa19.08■□□□□ 0.65
PNKP-201ENST00000322344 OR51I2Q9H344 312 aa19.08■□□□□ 0.65
PNKP-201ENST00000322344 SPRR3Q9UBC9 169 aa19.08■□□□□ 0.65
PNKP-201ENST00000322344 IGKV1-6A0A0C4DH72 117 aa19.08■□□□□ 0.64
PNKP-201ENST00000322344 HSPB6O14558 160 aa19.08■□□□□ 0.64
PNKP-201ENST00000322344 ZNF806P0C7X5 589 aa19.08■□□□□ 0.64
PNKP-201ENST00000322344 S100GP29377 79 aa19.08■□□□□ 0.64
PNKP-201ENST00000322344 TGIF1Q15583 401 aa19.08■□□□□ 0.64
PNKP-201ENST00000322344 FAM76BQ5HYJ3 339 aa19.08■□□□□ 0.64
PNKP-201ENST00000322344 CLEC9AQ6UXN8 241 aa19.08■□□□□ 0.64
PNKP-201ENST00000322344 OR2C3Q8N628 320 aa19.08■□□□□ 0.64
PNKP-201ENST00000322344 ZDHHC11Q9H8X9 412 aa19.08■□□□□ 0.64
PNKP-201ENST00000322344 IGKV1D-13A0A0B4J2D9 117 aa19.07■□□□□ 0.64
PNKP-201ENST00000322344 SFTA3P0C7M3 94 aa19.07■□□□□ 0.64
PNKP-201ENST00000322344 IGKV1-13P0DP09 117 aa19.07■□□□□ 0.64
PNKP-201ENST00000322344 SOX8P57073 446 aa19.07■□□□□ 0.64
PNKP-201ENST00000322344 EWSR1Q01844 656 aaKnown RBP eCLIP19.07■□□□□ 0.64
PNKP-201ENST00000322344 OR2T2Q6IF00 324 aa19.07■□□□□ 0.64
PNKP-201ENST00000322344 TRAV24A0A0B4J272 114 aa19.07■□□□□ 0.64
PNKP-201ENST00000322344 ARGFXA6NJG6 315 aa19.07■□□□□ 0.64
PNKP-201ENST00000322344 H0Y980 276 aa19.07■□□□□ 0.64
PNKP-201ENST00000322344 LILRA1O75019 489 aa19.07■□□□□ 0.64
PNKP-201ENST00000322344 TSPAN15O95858 294 aa19.07■□□□□ 0.64
PNKP-201ENST00000322344 NOVA1P51513 510 aaKnown RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms