RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 MRGPRDQ8TDS7 321 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 SMIM8Q96KF7 97 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 INSM2Q96T92 566 aaPredicted RBP6.26□□□□□ -1.41
SMC1A-201ENST00000322213 ZPBPQ9BS86 351 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 PEF1Q9UBV8 284 aaKnown RBP6.26□□□□□ -1.41
SMC1A-201ENST00000322213 CTSVO60911 334 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 THSD4Q6ZMP0 1018 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 LSRQ86X29 649 aaPredicted RBP6.26□□□□□ -1.41
SMC1A-201ENST00000322213 HOGA1Q86XE5 327 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 GDF15Q99988 308 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 SLC26A1Q9H2B4 701 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 KCNK15Q9H427 330 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 MSL2Q9HCI7 577 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 YBX1P67809 324 aaKnown RBP6.26□□□□□ -1.41
SMC1A-201ENST00000322213 ZNF117Q03924 483 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 OR10G4Q8NGN3 311 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 OR10G9Q8NGN4 311 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 OR10G7Q8NGN6 311 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 SPSB1Q96BD6 273 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 SIGLEC11Q96RL6 698 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 CACNG5Q9UF02 275 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 CSN1S1P47710 185 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 UTP23Q9BRU9 249 aaKnown RBP6.26□□□□□ -1.41
SMC1A-201ENST00000322213 HIF1ANQ9NWT6 349 aa6.26□□□□□ -1.41
SMC1A-201ENST00000322213 A0A1B0GU03 582 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 ZFP36L2P47974 494 aaKnown RBP6.25□□□□□ -1.41
SMC1A-201ENST00000322213 LIMS1P48059 325 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 PRAMEF20Q5VT98 475 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 ZNF880Q6PDB4 577 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 MRGPREQ86SM8 312 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 SGMS2Q8NHU3 365 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 ANXA10Q9UJ72 324 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 MRPS2Q9Y399 296 aaKnown RBP6.25□□□□□ -1.41
SMC1A-201ENST00000322213 OR2M5A3KFT3 312 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 MKRN2OSH3BPM6 223 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 TTRP02766 147 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 EN2P19622 333 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-201ENST00000322213 FUT7Q11130 342 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 HERPUD1Q15011 391 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 DLK2Q6UY11 383 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 Q6ZSR6 202 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 SLC36A1Q7Z2H8 476 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 OR2V1Q8NHB1 315 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 AQP3Q92482 292 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 CXCL16Q9H2A7 254 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 OBP2BQ9NPH6 170 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 TRAV8-7A0A075B6U6 113 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 LOC102724200A0A096LPH7 203 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-201ENST00000322213 ZFAND5O76080 213 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 SEMA4FO95754 770 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 KIRREL2Q6UWL6 708 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 NOXO1Q8NFA2 376 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 WDR13Q9H1Z4 485 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 ZNF430Q9H8G1 570 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-201ENST00000322213 HOXA5P20719 270 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 Q56UQ5 140 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 HIST1H2BKO60814 126 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 HIST1H2BJP06899 126 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 HIST1H2BOP23527 126 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 HIST1H2BBP33778 126 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 HIST1H2BDP58876 126 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 HIST1H2BCP62807 126 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 GPM6BQ13491 265 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 HIST2H2BEQ16778 126 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-201ENST00000322213 TMEFF1Q8IYR6 380 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 HIST1H2BHQ93079 126 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 CNRIP1Q96F85 164 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-201ENST00000322213 HIST1H2BNQ99877 126 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 HIST1H2BMQ99879 126 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 OR2J1Q9GZK6 312 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-201ENST00000322213 TMEM30AQ9NV96 361 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 SLC45A2Q9UMX9 530 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 ZFP30Q9Y2G7 519 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 SSUH2Q9Y2M2 353 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 HLA-DQA1P01909 254 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 CSRP3P50461 194 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 TBC1D26Q86UD7 250 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 NT5CQ8TCD5 201 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 SH2D2AQ9NP31 389 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 RNF24Q9Y225 148 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 FRG2CA6NGY1 282 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 ACTL6AO96019 429 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 GUSBP08236 651 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 FAHP16930 419 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 MESTQ5EB52 335 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 SAMD13Q5VXD3 122 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 C20orf196Q8IYI0 205 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 C16orf52Q8NHV5 167 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 ZNF707Q96C28 371 aaPredicted RBP6.25□□□□□ -1.41
SMC1A-201ENST00000322213 TCFL5Q9UL49 500 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 NCBP2LA6PVI3 153 aaKnown RBP6.25□□□□□ -1.41
SMC1A-201ENST00000322213 IDSB3KWA1 339 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 CD74P04233 296 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 IER3P46695 156 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 B4GALNT1Q00973 533 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 FMODQ06828 376 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 ARL16Q0P5N6 197 aa6.25□□□□□ -1.41
SMC1A-201ENST00000322213 RNF122Q9H9V4 155 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms