RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 DHRS3O75911 302 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 DSCR4P56555 118 aaPredicted RBP13.34□□□□□ -0.27
VARS2-201ENST00000321897 PKIAP61925 76 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 CFHR1Q03591 330 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 OSR2Q8N2R0 312 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 ZNF837Q96EG3 531 aaPredicted RBP13.34□□□□□ -0.27
VARS2-201ENST00000321897 DMRT1Q9Y5R6 373 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 AUP1Q9Y679 476 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 TRIOO75962 3097 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 FIGNL2A6NMB9 653 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 G3V3Q6 166 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 CALCRP30988 508 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 PSMB3P49720 205 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 MMP16P51512 607 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 SCAND1P57086 179 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 KRTDAPP60985 99 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 NAAAQ02083 359 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 DHODHQ02127 395 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 SLC35G3Q8N808 338 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 OR2M3Q8NG83 312 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 ERGIC1Q969X5 290 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 ZNF524Q96C55 264 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 ZDHHC8Q9ULC8 765 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 H0Y8G0 127 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 TMEM127O75204 238 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 P2RY4P51582 365 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 C1QL2Q7Z5L3 287 aa13.34□□□□□ -0.27
VARS2-201ENST00000321897 GNPNAT1Q96EK6 184 aaPredicted RBP13.34□□□□□ -0.27
VARS2-201ENST00000321897 METTL1Q9UBP6 276 aaKnown RBP13.34□□□□□ -0.27
VARS2-201ENST00000321897 CARHSP1Q9Y2V2 147 aaKnown RBP13.34□□□□□ -0.27
VARS2-201ENST00000321897 LOC102724200A0A096LPH7 203 aaPredicted RBP13.33□□□□□ -0.28
VARS2-201ENST00000321897 H0YIZ8 118 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 CD8AP01732 235 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 CD46P15529 392 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 OR2V1Q8NHB1 315 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 ADAMTS17Q8TE56 1095 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 SLC26A1Q9H2B4 701 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 ARV1Q9H2C2 271 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 MOB1AQ9H8S9 216 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 GNG12Q9UBI6 72 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 LHFPL6Q9Y693 200 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 ADAM20O43506 726 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 CA6P23280 308 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 GABRA4P48169 554 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 ISXQ2M1V0 245 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 RNF144BQ7Z419 303 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 RPS4Y2Q8TD47 263 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 HES7Q9BYE0 225 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 C5orf66Q9H5L9 145 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 PARD6AQ9NPB6 346 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 ZNF729A6NN14 1252 aaPredicted RBP13.33□□□□□ -0.28
VARS2-201ENST00000321897 ATP6V0CP27449 155 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 EXTL1Q92935 676 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 VPS25Q9BRG1 176 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 OR51I2Q9H344 312 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 CBLN4Q9NTU7 201 aa13.33□□□□□ -0.28
VARS2-201ENST00000321897 ATXN7O15265 892 aaPredicted RBP13.32□□□□□ -0.28
VARS2-201ENST00000321897 NDUFB7P17568 137 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 GCH1P30793 250 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 ZNF260Q3ZCT1 412 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 WDR5BQ86VZ2 330 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 CDX2Q99626 313 aaPredicted RBP13.32□□□□□ -0.28
VARS2-201ENST00000321897 FUT9Q9Y231 359 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 A0A1W2PQD3 144 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 AQP7O14520 342 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 DEGS1O15121 323 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 TIMM8AO60220 97 aaPredicted RBP13.32□□□□□ -0.28
VARS2-201ENST00000321897 METTL15P1P0C7V9 234 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 SUMO3P55854 103 aaPredicted RBP13.32□□□□□ -0.28
VARS2-201ENST00000321897 FAHD2BQ6P2I3 314 aaPredicted RBP13.32□□□□□ -0.28
VARS2-201ENST00000321897 DEGS2Q6QHC5 323 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 OR11L1Q8NGX0 322 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 FAHD2AQ96GK7 314 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 GPX7Q96SL4 187 aaPredicted RBP13.32□□□□□ -0.28
VARS2-201ENST00000321897 TIMP4Q99727 224 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 RYDENQ9NUL5 291 aaKnown RBP13.32□□□□□ -0.28
VARS2-201ENST00000321897 MDFIC2A0A1B0GVS7 189 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 ZNF154Q13106 437 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 SPINK9Q5DT21 86 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 COL13A1Q5TAT6 717 aaPredicted RBP13.32□□□□□ -0.28
VARS2-201ENST00000321897 ZNF439Q8NDP4 499 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 AP1S3Q96PC3 154 aa13.32□□□□□ -0.28
VARS2-201ENST00000321897 CDX1P47902 265 aaPredicted RBP13.31□□□□□ -0.28
VARS2-201ENST00000321897 PCP4P48539 62 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 HBG1P69891 147 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 HBG2P69892 147 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 TUSC5Q8IXB3 177 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 ADPRHL1Q8NDY3 354 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 OR13G1Q8NGZ3 307 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 OR6X1Q8NH79 312 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 MS4A10Q96PG2 267 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 COLCA2A8K830 154 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 TERTO14746 1132 aaKnown RBP13.31□□□□□ -0.28
VARS2-201ENST00000321897 LYZL6O75951 148 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 CST2P09228 141 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 HKR1P10072 659 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 ZNF133P52736 654 aaPredicted RBP13.31□□□□□ -0.28
VARS2-201ENST00000321897 TAS2R30P59541 319 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 PLAC9Q5JTB6 97 aa13.31□□□□□ -0.28
VARS2-201ENST00000321897 GFI1BQ5VTD9 330 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms