RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 SHARPINQ9H0F6 387 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 PCED1AQ9H1Q7 454 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 A0A1W2PPH5 198 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 FABP9Q0Z7S8 132 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 OR2H1Q9GZK4 316 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 GPR35Q9HC97 309 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 DEFA4P12838 97 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 KCNJ3P48549 501 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 MZT1Q08AG7 82 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 MPPED2Q15777 294 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 LAMTOR1Q6IAA8 161 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 ZNF429Q86V71 674 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 OR2J1Q9GZK6 312 aa14.39□□□□□ -0.11
CLIP4-201ENST00000320081 A0A1W2PPE2 198 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 LSM6P62312 80 aaKnown RBP14.38□□□□□ -0.11
CLIP4-201ENST00000320081 CEBPEQ15744 281 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 ACSM6Q6P461 480 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 APCDD1LQ8NCL9 501 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 OR10C1Q96KK4 312 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 S1PR3Q99500 378 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 SPSB2Q99619 263 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 COL4A6Q14031 1691 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 PTPN13Q12923 2485 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 PRR14LQ5THK1 2151 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 FHITP49789 147 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 DYNLT3P51808 116 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 ZNF260Q3ZCT1 412 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 RGS7BPQ6MZT1 257 aaPredicted RBP14.38□□□□□ -0.11
CLIP4-201ENST00000320081 SKA3Q8IX90 412 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 C1orf87Q8N0U7 546 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 OR13G1Q8NGZ3 307 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 CCL17Q92583 94 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 DAZAP1Q96EP5 407 aaKnown RBP14.38□□□□□ -0.11
CLIP4-201ENST00000320081 CHST5Q9GZS9 411 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 TMEM38BQ9NVV0 291 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 PRRG2O14669 202 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 DTYMKP23919 212 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 CHRNA7P36544 502 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 OR10X1Q8NGY0 326 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 TMED3Q9Y3Q3 217 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 TRAF3IP2O43734 574 aaPredicted RBP14.38□□□□□ -0.11
CLIP4-201ENST00000320081 AWAT1Q58HT5 328 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 ZNF826PQ6ZT77 177 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 LRP11Q86VZ4 500 aa14.38□□□□□ -0.11
CLIP4-201ENST00000320081 SCARF2Q96GP6 870 aaPredicted RBP14.38□□□□□ -0.11
CLIP4-201ENST00000320081 UBE2V2Q15819 145 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 CDCP2Q5VXM1 449 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 ZNF705AQ6ZN79 300 aaPredicted RBP14.37□□□□□ -0.11
CLIP4-201ENST00000320081 TIPARPQ7Z3E1 657 aaKnown RBP14.37□□□□□ -0.11
CLIP4-201ENST00000320081 GPX7Q96SL4 187 aaPredicted RBP14.37□□□□□ -0.11
CLIP4-201ENST00000320081 RSPO3Q9BXY4 272 aaPredicted RBP14.37□□□□□ -0.11
CLIP4-201ENST00000320081 TAAR3PQ9P1P4 343 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 RCC2Q9P258 522 aaKnown RBP14.37□□□□□ -0.11
CLIP4-201ENST00000320081 IL17BQ9UHF5 180 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 A0A1W2PR77 199 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 DHRS7CA6NNS2 312 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 SCTP09683 121 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 RFPL3SP0C7P2 107 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 PGA4P0DJD7 388 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 PGA3P0DJD8 388 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 SCAND1P57086 179 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 PPP1CBP62140 327 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 LRRC29Q8WV35 223 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 FAM103A1Q9BTL3 118 aaKnown RBP14.37□□□□□ -0.11
CLIP4-201ENST00000320081 MMP26Q9NRE1 261 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 DOCK11Q5JSL3 2073 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 MPTX1A8MV57 137 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 PRSS44E7EML9 344 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 STPG2Q8N412 459 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 OR13D1Q8NGV5 346 aa14.37□□□□□ -0.11
CLIP4-201ENST00000320081 NAT2P11245 290 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 RAB4AP20338 218 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 NPBWR2P48146 333 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 CEBPDP49716 269 aaPredicted RBP14.36□□□□□ -0.11
CLIP4-201ENST00000320081 ROM1Q03395 351 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 DCAF10Q5QP82 559 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 NCR3LG1Q68D85 454 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 TRAV20A0A0B4J274 112 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 ABCD4O14678 606 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 EFEMP2O95967 443 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 CTRB1P17538 263 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 TRIP6Q15654 476 aaKnown RBP14.36□□□□□ -0.11
CLIP4-201ENST00000320081 ANKRD55Q3KP44 614 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 CTRB2Q6GPI1 263 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 BSCL2Q96G97 398 aaPredicted RBP14.36□□□□□ -0.11
CLIP4-201ENST00000320081 TCEAL7Q9BRU2 100 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 TNFSF18Q9UNG2 199 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 MPGP29372 298 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 AESQ08117 197 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 MYPOPQ86VE0 399 aaPredicted RBP14.36□□□□□ -0.11
CLIP4-201ENST00000320081 POC1BQ8TC44 478 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 TMEM204Q9BSN7 226 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 COMMD5Q9GZQ3 224 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 DOK5Q9P104 306 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 SSUH2Q9Y2M2 353 aa14.36□□□□□ -0.11
CLIP4-201ENST00000320081 ZNF90Q03938 601 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 FOXC1Q12948 553 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 SMIM21Q3B7S5 101 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 ZNF880Q6PDB4 577 aa14.35□□□□□ -0.11
CLIP4-201ENST00000320081 ZNF574Q6ZN55 896 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms