RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 POC1AQ8NBT0 407 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 SCCPDHQ8NBX0 429 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 SNIP1Q8TAD8 396 aaKnown RBP6.45□□□□□ -1.38
IFT88-201ENST00000319980 KLF14Q8TD94 323 aaPredicted RBP6.45□□□□□ -1.38
IFT88-201ENST00000319980 MRPL24Q96A35 216 aaKnown RBP6.45□□□□□ -1.38
IFT88-201ENST00000319980 PIK3IP1Q96FE7 263 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 SYT3Q9BQG1 590 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 ADAT1Q9BUB4 502 aaKnown RBP6.45□□□□□ -1.38
IFT88-201ENST00000319980 NAA60Q9H7X0 242 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 SPACA1Q9HBV2 294 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 PLSCR4Q9NRQ2 329 aa6.45□□□□□ -1.38
IFT88-201ENST00000319980 TRAV24A0A0B4J272 114 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 MSGN1A6NI15 193 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 J3QT63 122 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 GRPP07492 148 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 RCC1P18754 421 aaPredicted RBP6.44□□□□□ -1.38
IFT88-201ENST00000319980 MPV17P39210 176 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 ZNF154Q13106 437 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 IL15RAQ13261 267 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 HERPUD1Q15011 391 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 AANATQ16613 207 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 FAM76BQ5HYJ3 339 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 SPIN3Q5JUX0 258 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 PRSS54Q6PEW0 395 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 PDZD9Q8IXQ8 264 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 SLC38A6Q8IZM9 456 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 STARD4Q96DR4 205 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 GALNT14Q96FL9 552 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 PKIBQ9C010 78 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 OBP2BQ9NPH6 170 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 MEMO1Q9Y316 297 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 H0YL77 283 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 DEGS1O15121 323 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 PHF1O43189 567 aaPredicted RBP6.44□□□□□ -1.38
IFT88-201ENST00000319980 DIRAS3O95661 229 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 PET100P0DJ07 73 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 NUP62P37198 522 aaPredicted RBP6.44□□□□□ -1.38
IFT88-201ENST00000319980 Q6ZS92 163 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 SEM1Q6ZVN7 128 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 LYZL2Q7Z4W2 148 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 OR1S1Q8NH92 325 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 GLYATL2Q8WU03 294 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 SECTM1Q8WVN6 248 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 RBPMSQ93062 196 aaKnown RBP6.44□□□□□ -1.38
IFT88-201ENST00000319980 SDHAF2Q9NX18 166 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 TINAGQ9UJW2 476 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 FZR1Q9UM11 496 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 PROCRQ9UNN8 238 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 ATP23Q9Y6H3 246 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 KIR2DS1A0A191URI9 304 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 hCG_1807616A0A1W2PRN6 198 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 LRP5LA4QPB2 252 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 TRDCB7Z8K6 153 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 CECR9P0C854 216 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 HOXB1P14653 301 aaPredicted RBP6.44□□□□□ -1.38
IFT88-201ENST00000319980 GNRHRP30968 328 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 KIR2DS4P43632 304 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 FABP6P51161 128 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 UCP3P55916 312 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 TMEM187Q14656 261 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 KIR2DS1Q14954 304 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 OR8G1Q15617 311 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 Q6ZS49 121 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 LINC00596Q86U02 117 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 RPRMLQ8N4K4 120 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 GPHA2Q96T91 129 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 ZNF71Q9NQZ8 489 aaPredicted RBP6.44□□□□□ -1.38
IFT88-201ENST00000319980 RASL12Q9NYN1 266 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 ATMQ13315 3056 aa6.44□□□□□ -1.38
IFT88-201ENST00000319980 IGKV1-6A0A0C4DH72 117 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 IQCF6A8MYZ5 107 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 MEX3BQ6ZN04 569 aaKnown RBP6.43□□□□□ -1.38
IFT88-201ENST00000319980 CCDC28AQ8IWP9 274 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 ZNF565Q8N9K5 539 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 C1orf162Q8NEQ5 155 aaPredicted RBP6.43□□□□□ -1.38
IFT88-201ENST00000319980 MRPL30Q8TCC3 161 aaKnown RBP6.43□□□□□ -1.38
IFT88-201ENST00000319980 IL1F10Q8WWZ1 152 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 TP53RKQ96S44 253 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 SUCNR1Q9BXA5 334 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 RIMS4Q9H426 269 aaPredicted RBP6.43□□□□□ -1.38
IFT88-201ENST00000319980 POLDIP2Q9Y2S7 368 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 APC2O95996 2303 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 TRAV39A0A0B4J263 110 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 SIRPB1O00241 398 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 MPPED1O15442 326 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 NXPH2O95156 264 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 CGAP01215 116 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 SNTB1Q13884 538 aaKnown RBP6.43□□□□□ -1.38
IFT88-201ENST00000319980 IL13RA2Q14627 380 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 SRSF7Q16629 238 aaKnown RBP eCLIP6.43□□□□□ -1.38
IFT88-201ENST00000319980 LIAT1Q6ZQX7 453 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 PRR18Q8N4B5 295 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 RBMXL3Q8N7X1 1067 aaKnown RBP6.43□□□□□ -1.38
IFT88-201ENST00000319980 CCDC71LQ8N9Z2 235 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 GALNT11Q8NCW6 608 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 MSI2Q96DH6 328 aaKnown RBP6.43□□□□□ -1.38
IFT88-201ENST00000319980 CNTNAP3BQ96NU0 1288 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 USB1Q9BQ65 265 aaKnown RBP6.43□□□□□ -1.38
IFT88-201ENST00000319980 CNTNAP3Q9BZ76 1288 aa6.43□□□□□ -1.38
IFT88-201ENST00000319980 SLC25A32Q9H2D1 315 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms