RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 FAM90A12PA8MX19 464 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 FAM90A5PA8MXJ8 464 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 A8MXK9 166 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 FAM90A23PA8MXZ1 464 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 IFNL4K9M1U5 179 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 LANCL1O43813 399 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 FAM90A15PP0C7V4 464 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 FAM90A13PP0C7W8 464 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 FAM90A14PP0C7W9 464 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 FAM90A24PP0C7X0 464 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 BLVRBP30043 206 aaPredicted RBP13.55□□□□□ -0.24
TUBB3-201ENST00000315491 SSTR2P30874 369 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 MNDAP41218 407 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 PDCD1Q15116 288 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 SMIM21Q3B7S5 101 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 PYHIN1Q6K0P9 492 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 LINC00596Q86U02 117 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 CCL17Q92583 94 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 SEH1LQ96EE3 360 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 CCL19Q99731 98 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 NUDT15Q9NV35 164 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 COL12A1Q99715 3063 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.55□□□□□ -0.24
TUBB3-201ENST00000315491 OVOL3O00110 214 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 OR7C1O76099 320 aaPredicted RBP13.55□□□□□ -0.24
TUBB3-201ENST00000315491 KNG1P01042 644 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 DUSP1P28562 367 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 CD80P33681 288 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 PTH2RP49190 550 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 TMEM50BP56557 158 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 OPCMLQ14982 345 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 MPV17LQ2QL34 196 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 SPIN3Q5JUX0 258 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 FAM201AQ5SY85 155 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 BTN2A1Q7KYR7 527 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 C1orf87Q8N0U7 546 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 RAB3CQ96E17 227 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 ZNF581Q9P0T4 197 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 DNAJB11Q9UBS4 358 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 PRELID3BQ9Y3B1 194 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 CACNA1DQ01668 2161 aa13.55□□□□□ -0.24
TUBB3-201ENST00000315491 CHD3Q12873 2000 aaKnown RBP13.55□□□□□ -0.24
TUBB3-201ENST00000315491 TRAV6A0A075B6T7 132 aa13.54□□□□□ -0.24
TUBB3-201ENST00000315491 TMEM178BH3BS89 294 aa13.54□□□□□ -0.24
TUBB3-201ENST00000315491 PITPNAQ00169 270 aa13.54□□□□□ -0.24
TUBB3-201ENST00000315491 FLI1Q01543 452 aaPredicted RBP13.54□□□□□ -0.24
TUBB3-201ENST00000315491 ZNF146Q15072 292 aa13.54□□□□□ -0.24
TUBB3-201ENST00000315491 HFEQ30201 348 aa13.54□□□□□ -0.24
TUBB3-201ENST00000315491 PLAC9Q5JTB6 97 aa13.54□□□□□ -0.24
TUBB3-201ENST00000315491 Q6ZTK2 550 aa13.54□□□□□ -0.24
TUBB3-201ENST00000315491 FAM90A1Q86YD7 464 aa13.54□□□□□ -0.24
TUBB3-201ENST00000315491 LURAP1LQ8IV03 231 aa13.54□□□□□ -0.24
TUBB3-201ENST00000315491 RDH5Q92781 318 aa13.54□□□□□ -0.24
TUBB3-201ENST00000315491 YIPF5Q969M3 257 aa13.54□□□□□ -0.24
TUBB3-201ENST00000315491 ARHGAP5-AS1Q96IT6 56 aa13.54□□□□□ -0.24
TUBB3-201ENST00000315491 ABHD1Q96SE0 405 aa13.54□□□□□ -0.24
TUBB3-201ENST00000315491 IFT22Q9H7X7 185 aa13.54□□□□□ -0.24
TUBB3-201ENST00000315491 G3V3Q6 166 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 H2AFB2P0C5Z0 115 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 COL8A2P25067 703 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 S100A12P80511 92 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 MRPS11P82912 194 aaKnown RBP13.53□□□□□ -0.24
TUBB3-201ENST00000315491 TUSC1Q2TAM9 212 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 ZNF260Q3ZCT1 412 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 NKAPLQ5M9Q1 402 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 SFRP4Q6FHJ7 346 aaPredicted RBP13.53□□□□□ -0.24
TUBB3-201ENST00000315491 RTN4RL2Q86UN3 420 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 OR5T2Q8NGG2 359 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 C15orf40Q8WUR7 153 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 PCNPQ8WW12 178 aaKnown RBP13.53□□□□□ -0.24
TUBB3-201ENST00000315491 ZMAT3Q9HA38 289 aaKnown RBP13.53□□□□□ -0.24
TUBB3-201ENST00000315491 OR14J1Q9UGF5 321 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 IGHV3OR15-7A0A075B7D8 119 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 LYNX1G3V0Z9 82 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 DEGS1O15121 323 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 PDCD6O75340 191 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 B3GALNT1O75752 331 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 LY6HO94772 140 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 HAND1O96004 215 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 LYNX1P0DP58 116 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 HIST1H1DP16402 221 aaKnown RBP13.53□□□□□ -0.24
TUBB3-201ENST00000315491 GNB3P16520 340 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 CHATP28329 748 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 CDNFQ49AH0 187 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 Q6P435 159 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 NLRC3Q7RTR2 1065 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 HSD17B13Q7Z5P4 300 aaPredicted RBP13.53□□□□□ -0.24
TUBB3-201ENST00000315491 EIF4E3Q8N5X7 224 aaKnown RBP13.53□□□□□ -0.24
TUBB3-201ENST00000315491 PECRQ9BY49 303 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 AUNIPQ9H7T9 357 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 PLEKHJ1Q9NW61 149 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 PFDN2Q9UHV9 154 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 HSF4Q9ULV5 492 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 WIPI2Q9Y4P8 454 aa13.53□□□□□ -0.24
TUBB3-201ENST00000315491 PPIAL4EA0A075B759 164 aa13.52□□□□□ -0.25
TUBB3-201ENST00000315491 OOEPA6NGQ2 149 aa13.52□□□□□ -0.25
TUBB3-201ENST00000315491 RFPL4AA6NLU0 287 aa13.52□□□□□ -0.25
TUBB3-201ENST00000315491 PPIAL4DF5H284 164 aa13.52□□□□□ -0.25
TUBB3-201ENST00000315491 RFPL4AL1F8VTS6 287 aa13.52□□□□□ -0.25
TUBB3-201ENST00000315491 MFNGO00587 321 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms