RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 HES4Q9HCC6 221 aa12.07□□□□□ -0.48
SPAST-201ENST00000315285 TRBV5-7A0A0A0MS05 114 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 MBPP02686 304 aaPredicted RBP12.06□□□□□ -0.48
SPAST-201ENST00000315285 ARG1P05089 322 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 CLEC3BP05452 202 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 NMBP08949 121 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 TUSC1Q2TAM9 212 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 VMA21Q3ZAQ7 101 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 C9orf152Q5JTZ5 239 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 VAX1Q5SQQ9 334 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 FAM181AQ8N9Y4 354 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 CLEC1BQ9P126 229 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 NKX2-6A6NCS4 301 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 CTSBP07858 339 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 EWSR1Q01844 656 aaKnown RBP eCLIP12.06□□□□□ -0.48
SPAST-201ENST00000315285 ZNF154Q13106 437 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 HES3Q5TGS1 186 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 UNQ9370/PRO34162Q6UXP9 181 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 ISOC2Q96AB3 205 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 KCNK17Q96T54 332 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 TRAPPC1Q9Y5R8 145 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 A0A0J9YW62 118 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 ERVH48-1M5A8F1 160 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 CDIPTO14735 213 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 SPEM2Q0P670 501 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 FAM27BQ5VT28 67 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 SCARF2Q96GP6 870 aaPredicted RBP12.06□□□□□ -0.48
SPAST-201ENST00000315285 TMEM56Q96MV1 263 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 SDHCQ99643 169 aaPredicted RBP12.06□□□□□ -0.48
SPAST-201ENST00000315285 LPAR5Q9H1C0 372 aa12.06□□□□□ -0.48
SPAST-201ENST00000315285 TET1Q8NFU7 2136 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 IGKV1D-42A0A075B6H8 117 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 A0A0U1RQV5 110 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 A0A1W2PP11 408 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 J3QT63 122 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 SPTA1P02549 2419 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 DAOP14920 347 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 ZNF260Q3ZCT1 412 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 C1orf100Q5SVJ3 147 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 GFRALQ6UXV0 394 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 FGF2P09038 288 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 KLF3P57682 345 aaPredicted RBP12.05□□□□□ -0.48
SPAST-201ENST00000315285 RPL11P62913 178 aaKnown RBP12.05□□□□□ -0.48
SPAST-201ENST00000315285 FAM3AP98173 230 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 LINC01590Q5TEZ4 76 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 ADIPOR1Q96A54 375 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 RAB33BQ9H082 229 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 PARP11Q9NR21 331 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 SLC7A10Q9NS82 523 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 C7orf77A4D0Y5 90 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 C3orf80F5H4A9 247 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 KLK10O43240 276 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 ACTL6AO96019 429 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 OR5A2Q8NGI9 324 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 PATE3B3GLJ2 98 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 ISG15P05161 165 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 PMELP40967 661 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 PNRC1Q12796 327 aaPredicted RBP12.05□□□□□ -0.48
SPAST-201ENST00000315285 BTNL3Q6UXE8 466 aa12.05□□□□□ -0.48
SPAST-201ENST00000315285 ZNF236Q9UL36 1845 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 IGHV3-13P01766 116 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 IGHV3-7P01780 117 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 HLA-GP17693 338 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 BMP5P22003 454 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 TPPP2P59282 170 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 OR10AD1Q8NGE0 317 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 GLRX2Q9NS18 164 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 R4GN57 208 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 RPL36A-HNRNPH2H7BZ11 118 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 SEC11BP0C7V7 166 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 SOX8P57073 446 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 KRTDAPP60985 99 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 FAM162BQ5T6X4 162 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 MOB3BQ86TA1 216 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 NEIL1Q96FI4 390 aaPredicted RBP12.04□□□□□ -0.48
SPAST-201ENST00000315285 TINAGQ9UJW2 476 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 OR2W1Q9Y3N9 320 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 SHISA3A0PJX4 238 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 KCNAB3O43448 404 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 KLF4O43474 513 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 THY1P04216 161 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 PGA4P0DJD7 388 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 CHRNA7P36544 502 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 NAAAQ02083 359 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 OR5D13Q8NGL4 314 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 OR6C3Q9NZP0 311 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 SLC45A2Q9UMX9 530 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 MFNGO00587 321 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 HAND1O96004 215 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 KIR2DS2P43631 304 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 RHOBP62745 196 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 TNFAIP6P98066 277 aaPredicted RBP12.04□□□□□ -0.48
SPAST-201ENST00000315285 DEFB124Q8NES8 71 aa12.04□□□□□ -0.48
SPAST-201ENST00000315285 MYOZ1Q9NP98 299 aaPredicted RBP12.04□□□□□ -0.48
SPAST-201ENST00000315285 C21orf140B9A014 251 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 LMX1BO60663 402 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 FCGR3AP08637 254 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 MEOX2P50222 304 aa12.03□□□□□ -0.48
SPAST-201ENST00000315285 RBM11P57052 281 aaKnown RBP12.03□□□□□ -0.48
SPAST-201ENST00000315285 TEX30Q5JUR7 227 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms