RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 P4HTMQ9NXG6 502 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 TP53I11O14683 189 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 CST7O76096 145 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 PTBP3O95758 552 aaKnown RBP11.59□□□□□ -0.55
SKA3-202ENST00000314759 CELA2AP08217 269 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 SNRPCP09234 159 aaKnown RBP11.59□□□□□ -0.55
SKA3-202ENST00000314759 EPHA1P21709 976 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 IL2RGP31785 369 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 MALLQ13021 153 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 ZNF100Q8IYN0 542 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 BATF2Q8N1L9 274 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 OR8G5Q8NG78 346 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 OR1F12Q8NHA8 337 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 TVP23CQ96ET8 276 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 PACRGQ96M98 296 aaPredicted RBP11.59□□□□□ -0.55
SKA3-202ENST00000314759 GPHA2Q96T91 129 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 SSX3Q99909 188 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 CRLF2Q9HC73 371 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 SLC7A11Q9UPY5 501 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 TSTD3H0UI37 97 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 ZIC3O60481 467 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 SCAF4O95104 1147 aaKnown RBP11.59□□□□□ -0.55
SKA3-202ENST00000314759 TMEM50AO95807 157 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 PGA5P0DJD9 388 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 SSX2Q16385 188 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 TMEM211Q6ICI0 200 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 TMEM56Q96MV1 263 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 HIST1H2BLQ99880 126 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 ZNF442Q9H7R0 627 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 UBE2J1Q9Y385 318 aaPredicted RBP11.59□□□□□ -0.55
SKA3-202ENST00000314759 WSB1Q9Y6I7 421 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 TMEM56-RWDD3S4R434 201 aa11.59□□□□□ -0.55
SKA3-202ENST00000314759 A0A087WZY1 265 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 G3V3Y1 287 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 SLC33A1O00400 549 aaPredicted RBP11.58□□□□□ -0.56
SKA3-202ENST00000314759 JMJD7P0C870 316 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 NTF4P34130 210 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 RUNX1Q01196 453 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 EXT1Q16394 746 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 TBC1D26Q86UD7 250 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 ZNF695Q8IW36 515 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 SELENOHQ8IZQ5 122 aaKnown RBP11.58□□□□□ -0.56
SKA3-202ENST00000314759 C17orf78Q8N4C9 275 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 TMEM217Q8N7C4 229 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 SNX22Q96L94 193 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 SLC25A31Q9H0C2 315 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 SLC7A10Q9NS82 523 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 IL36GQ9NZH8 169 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 ELOA3CA0A087WX78 387 aaPredicted RBP11.58□□□□□ -0.56
SKA3-202ENST00000314759 CCDC163A0A0D9SF12 145 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 A0A0J9YW62 118 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 TNFSF11O14788 317 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 PHOX2AO14813 284 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 TOX3O15405 576 aaPredicted RBP11.58□□□□□ -0.56
SKA3-202ENST00000314759 HSPA12AO43301 675 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 ADAM20O43506 726 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 OR7C1O76099 320 aaPredicted RBP11.58□□□□□ -0.56
SKA3-202ENST00000314759 DYNLT3P51808 116 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 RBM11P57052 281 aaKnown RBP11.58□□□□□ -0.56
SKA3-202ENST00000314759 SRPXP78539 464 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 STX12Q86Y82 276 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 TGIF2LXQ8IUE1 241 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 FAM210BQ96KR6 192 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 NIPSNAP3BQ9BS92 247 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 PLSCR2Q9NRY7 297 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 RARRES3Q9UL19 164 aa11.58□□□□□ -0.56
SKA3-202ENST00000314759 ZNF732B4DXR9 585 aa11.57□□□□□ -0.56
SKA3-202ENST00000314759 CCL3P10147 92 aa11.57□□□□□ -0.56
SKA3-202ENST00000314759 FUT3P21217 361 aa11.57□□□□□ -0.56
SKA3-202ENST00000314759 OR8B8Q15620 311 aa11.57□□□□□ -0.56
SKA3-202ENST00000314759 RAB30Q15771 203 aa11.57□□□□□ -0.56
SKA3-202ENST00000314759 DPPA2Q7Z7J5 298 aa11.57□□□□□ -0.56
SKA3-202ENST00000314759 CALHM1Q8IU99 346 aa11.57□□□□□ -0.56
SKA3-202ENST00000314759 GPR137CQ8N3F9 429 aa11.57□□□□□ -0.56
SKA3-202ENST00000314759 SRXN1Q9BYN0 137 aa11.57□□□□□ -0.56
SKA3-202ENST00000314759 PROK2Q9HC23 129 aa11.57□□□□□ -0.56
SKA3-202ENST00000314759 C19orf25Q9UFG5 118 aaPredicted RBP11.57□□□□□ -0.56
SKA3-202ENST00000314759 HSPB1P04792 205 aaKnown RBP11.57□□□□□ -0.56
SKA3-202ENST00000314759 ZNF32P17041 273 aa11.57□□□□□ -0.56
SKA3-202ENST00000314759 BTF3P20290 206 aaKnown RBP11.57□□□□□ -0.56
SKA3-202ENST00000314759 NPBWR2P48146 333 aa11.57□□□□□ -0.56
SKA3-202ENST00000314759 FUT6P51993 359 aa11.57□□□□□ -0.56
SKA3-202ENST00000314759 ZNF92Q03936 586 aa11.57□□□□□ -0.56
SKA3-202ENST00000314759 SPIN3Q5JUX0 258 aa11.57□□□□□ -0.56
SKA3-202ENST00000314759 ZNF506Q5JVG8 444 aa11.57□□□□□ -0.56
SKA3-202ENST00000314759 CA14Q9ULX7 337 aa11.57□□□□□ -0.56
SKA3-202ENST00000314759 OR6C6A6NF89 314 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 LIFP15018 202 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 VAMP2P63027 116 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 AKR1C8PQ5T2L2 129 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 ZNF818PQ6ZRF7 136 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 FAM185AQ8N0U4 392 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 CLDND2Q8NHS1 167 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 POM121Q96HA1 1249 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 SIGLEC12Q96PQ1 595 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 PCED1AQ9H1Q7 454 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 TCFL5Q9UL49 500 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 PTRH2Q9Y3E5 179 aaKnown RBP11.56□□□□□ -0.56
SKA3-202ENST00000314759 hCG_38984A0A1B0GV85 526 aa11.56□□□□□ -0.56
SKA3-202ENST00000314759 NXPH3O95157 252 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms