RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 PRSS57Q6UWY2 283 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 GCDHQ92947 438 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-201ENST00000311487 Q96M66 194 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 LPAR5Q9H1C0 372 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 TMEM82A0PJX8 343 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 H7C1Q1 480 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 DVL1O14640 695 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 CCNKO75909 580 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 LMO4P61968 165 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 RPS27AP62979 156 aaKnown RBP15.11■□□□□ 0.01
HMGA1-201ENST00000311487 KLF9Q13886 244 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-201ENST00000311487 ZNF146Q15072 292 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 TMEM69Q5SWH9 247 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 SIGIRRQ6IA17 410 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 FIP1L1Q6UN15 594 aaKnown RBP15.11■□□□□ 0.01
HMGA1-201ENST00000311487 MUC20Q8N307 709 aaPredicted RBP15.11■□□□□ 0.01
HMGA1-201ENST00000311487 ST8SIA4Q92187 359 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 ZNF665Q9H7R5 613 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 GHRLQ9UBU3 117 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 MALRD1Q5VYJ5 2156 aa15.11■□□□□ 0.01
HMGA1-201ENST00000311487 ABCA2Q9BZC7 2435 aa15.1■□□□□ 0.01
HMGA1-201ENST00000311487 A0A096LNT2 108 aa15.1■□□□□ 0.01
HMGA1-201ENST00000311487 TRAV24A0A0B4J272 114 aa15.1■□□□□ 0.01
HMGA1-201ENST00000311487 FAM157AC9JC47 383 aa15.1■□□□□ 0.01
HMGA1-201ENST00000311487 SLC33A1O00400 549 aaPredicted RBP15.1■□□□□ 0.01
HMGA1-201ENST00000311487 WNT2P09544 360 aa15.1■□□□□ 0.01
HMGA1-201ENST00000311487 NDUFB7P17568 137 aa15.1■□□□□ 0.01
HMGA1-201ENST00000311487 TAS2R20P59543 309 aa15.1■□□□□ 0.01
HMGA1-201ENST00000311487 LCN2P80188 198 aa15.1■□□□□ 0.01
HMGA1-201ENST00000311487 EDDM3AQ14507 147 aa15.1■□□□□ 0.01
HMGA1-201ENST00000311487 ATXN7L3Q14CW9 347 aaPredicted RBP15.1■□□□□ 0.01
HMGA1-201ENST00000311487 ZNF788Q6ZQV5 615 aa15.1■□□□□ 0.01
HMGA1-201ENST00000311487 SPICQ8N5J4 248 aa15.1■□□□□ 0.01
HMGA1-201ENST00000311487 Q8NFD4 153 aa15.1■□□□□ 0.01
HMGA1-201ENST00000311487 OR4S1Q8NGB4 309 aa15.1■□□□□ 0.01
HMGA1-201ENST00000311487 OR6F1Q8NGZ6 308 aa15.1■□□□□ 0.01
HMGA1-201ENST00000311487 UBE2QL1A1L167 161 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 HMX3A6NHT5 357 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 GABARAPH6UMI1 98 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 IGHV2-5P01817 119 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 TRAPPC2P0DI81 140 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 TRAPPC2BP0DI82 140 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 SLC25A16P16260 332 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 ZFP36P26651 326 aaKnown RBP15.09■□□□□ 0.01
HMGA1-201ENST00000311487 GDNFP39905 211 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 TATDN3Q17R31 274 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 TMEM155Q4W5P6 130 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 SPIN3Q5JUX0 258 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 OLFML2AQ68BL7 652 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 C17orf107Q6ZR85 190 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 C6orf201Q7Z4U5 140 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 OR52I2Q8NH67 350 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 CREB3L1Q96BA8 519 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 PATZ1Q9HBE1 687 aaKnown RBP15.09■□□□□ 0.01
HMGA1-201ENST00000311487 ELF5Q9UKW6 265 aaPredicted RBP15.09■□□□□ 0.01
HMGA1-201ENST00000311487 RAB22AQ9UL26 194 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 CSPG4Q6UVK1 2322 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 ORC5O43913 435 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 BLVRBP30043 206 aaPredicted RBP15.09■□□□□ 0.01
HMGA1-201ENST00000311487 IL13RA1P78552 427 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 KCNJ8Q15842 424 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 ZNF841Q6ZN19 808 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 SUMF2Q8NBJ7 301 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 H1FXQ92522 213 aaKnown RBP15.09■□□□□ 0.01
HMGA1-201ENST00000311487 C7orf50Q9BRJ6 194 aaKnown RBP15.09■□□□□ 0.01
HMGA1-201ENST00000311487 SHARPINQ9H0F6 387 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 PCDHB16Q9NRJ7 776 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 ALG5Q9Y673 324 aa15.09■□□□□ 0.01
HMGA1-201ENST00000311487 DOCK11Q5JSL3 2073 aa15.08■□□□□ 0.01
HMGA1-201ENST00000311487 NKX6-3A6NJ46 265 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 CENPXA8MT69 81 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 TPPPO94811 219 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 PTHLHP12272 177 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 HLA-DMAP28067 261 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 MRPS10P82664 201 aaKnown RBP15.08■□□□□ 0
HMGA1-201ENST00000311487 AESQ08117 197 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 DYRK1AQ13627 763 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 PAN3Q58A45 887 aaKnown RBP15.08■□□□□ 0
HMGA1-201ENST00000311487 RAB12Q6IQ22 244 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 SLC36A1Q7Z2H8 476 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 OR2W3Q7Z3T1 314 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 CHST4Q8NCG5 386 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 OR8B3Q8NGG8 313 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 NEK7Q8TDX7 302 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 OR8B2Q96RD0 313 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 FAAP24Q9BTP7 215 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 SLC25A10Q9UBX3 287 aaPredicted RBP15.08■□□□□ 0
HMGA1-201ENST00000311487 MIOXQ9UGB7 285 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 GLS2Q9UI32 602 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 RBMX2Q9Y388 322 aaKnown RBP15.08■□□□□ 0
HMGA1-201ENST00000311487 CR1P17927 2039 aa15.08■□□□□ 0
HMGA1-201ENST00000311487 TRAV39A0A0B4J263 110 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 INMT-MINDY4F8WBC2 141 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 SIGLEC5O15389 551 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 XRCC3O43542 346 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 ZNF737O75373 536 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 CHRM2P08172 466 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 EDDM3BP56851 147 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 GRK1Q15835 563 aa15.07■□□□□ 0
HMGA1-201ENST00000311487 ATPAF1Q5TC12 328 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms