RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 BEX2Q9BXY8 128 aa18.4■□□□□ 0.54
HOXD4-201ENST00000306324 BARHL1Q9BZE3 327 aa18.4■□□□□ 0.54
HOXD4-201ENST00000306324 LPAR5Q9H1C0 372 aa18.4■□□□□ 0.54
HOXD4-201ENST00000306324 RCC2Q9P258 522 aaKnown RBP18.4■□□□□ 0.54
HOXD4-201ENST00000306324 FBLN5Q9UBX5 448 aa18.4■□□□□ 0.54
HOXD4-201ENST00000306324 PEX16Q9Y5Y5 336 aa18.4■□□□□ 0.54
HOXD4-201ENST00000306324 MXRA5Q9NR99 2828 aa18.4■□□□□ 0.54
HOXD4-201ENST00000306324 A0A1W2PPH5 198 aa18.39■□□□□ 0.54
HOXD4-201ENST00000306324 MCRIP1C9JLW8 97 aa18.39■□□□□ 0.54
HOXD4-201ENST00000306324 LDLRAD4O15165 306 aa18.39■□□□□ 0.54
HOXD4-201ENST00000306324 TOX4O94842 621 aa18.39■□□□□ 0.54
HOXD4-201ENST00000306324 FUT3P21217 361 aa18.39■□□□□ 0.54
HOXD4-201ENST00000306324 ERP29P30040 261 aaKnown RBP18.39■□□□□ 0.54
HOXD4-201ENST00000306324 GLIPR1P48060 266 aa18.39■□□□□ 0.54
HOXD4-201ENST00000306324 ZNF273Q14593 569 aa18.39■□□□□ 0.54
HOXD4-201ENST00000306324 SIGIRRQ6IA17 410 aa18.39■□□□□ 0.54
HOXD4-201ENST00000306324 CMTM4Q8IZR5 234 aa18.39■□□□□ 0.54
HOXD4-201ENST00000306324 DMRTB1Q96MA1 342 aa18.39■□□□□ 0.54
HOXD4-201ENST00000306324 WDFY2Q96P53 400 aa18.39■□□□□ 0.54
HOXD4-201ENST00000306324 CDC42EP3Q9UKI2 254 aa18.39■□□□□ 0.54
HOXD4-201ENST00000306324 RAB22AQ9UL26 194 aa18.39■□□□□ 0.54
HOXD4-201ENST00000306324 NAV3Q8IVL0 2385 aa18.39■□□□□ 0.53
HOXD4-201ENST00000306324 hADV38S2A0JD32 116 aa18.39■□□□□ 0.53
HOXD4-201ENST00000306324 H3BUI4 141 aa18.39■□□□□ 0.53
HOXD4-201ENST00000306324 SNRPBP14678 240 aaKnown RBP18.39■□□□□ 0.53
HOXD4-201ENST00000306324 KCNJ3P48549 501 aa18.39■□□□□ 0.53
HOXD4-201ENST00000306324 EFNB2P52799 333 aa18.39■□□□□ 0.53
HOXD4-201ENST00000306324 MEF2CQ06413 473 aaPredicted RBP18.39■□□□□ 0.53
HOXD4-201ENST00000306324 TRAPPC6BQ86SZ2 158 aa18.39■□□□□ 0.53
HOXD4-201ENST00000306324 PLPPR1Q8TBJ4 325 aa18.39■□□□□ 0.53
HOXD4-201ENST00000306324 POM121Q96HA1 1249 aa18.39■□□□□ 0.53
HOXD4-201ENST00000306324 NEDD4LQ96PU5 975 aa18.39■□□□□ 0.53
HOXD4-201ENST00000306324 LPAR3Q9UBY5 353 aa18.39■□□□□ 0.53
HOXD4-201ENST00000306324 KPTNQ9Y664 436 aa18.39■□□□□ 0.53
HOXD4-201ENST00000306324 A0A0A6YYD4 124 aa18.38■□□□□ 0.53
HOXD4-201ENST00000306324 PDCD6O75340 191 aa18.38■□□□□ 0.53
HOXD4-201ENST00000306324 CCL3L1P16619 93 aa18.38■□□□□ 0.53
HOXD4-201ENST00000306324 BLVRBP30043 206 aaPredicted RBP18.38■□□□□ 0.53
HOXD4-201ENST00000306324 SRP14P37108 136 aaKnown RBP18.38■□□□□ 0.53
HOXD4-201ENST00000306324 VEGFCP49767 419 aa18.38■□□□□ 0.53
HOXD4-201ENST00000306324 BLMHQ13867 455 aa18.38■□□□□ 0.53
HOXD4-201ENST00000306324 RBM39Q14498 530 aaKnown RBP18.38■□□□□ 0.53
HOXD4-201ENST00000306324 CHRFAM7AQ494W8 412 aa18.38■□□□□ 0.53
HOXD4-201ENST00000306324 CROCCP3Q8IVE0 287 aa18.38■□□□□ 0.53
HOXD4-201ENST00000306324 KIR3DL3Q8N743 410 aa18.38■□□□□ 0.53
HOXD4-201ENST00000306324 LGALS14Q8TCE9 139 aa18.38■□□□□ 0.53
HOXD4-201ENST00000306324 SIRPDQ9H106 197 aa18.38■□□□□ 0.53
HOXD4-201ENST00000306324 ODAMA1E959 279 aa18.37■□□□□ 0.53
HOXD4-201ENST00000306324 SOCS1O15524 211 aa18.37■□□□□ 0.53
HOXD4-201ENST00000306324 PAHP00439 452 aa18.37■□□□□ 0.53
HOXD4-201ENST00000306324 RSBN1Q5VWQ0 802 aaPredicted RBP18.37■□□□□ 0.53
HOXD4-201ENST00000306324 TCF23Q7RTU1 214 aa18.37■□□□□ 0.53
HOXD4-201ENST00000306324 NDNFQ8TB73 568 aa18.37■□□□□ 0.53
HOXD4-201ENST00000306324 NANPQ8TBE9 248 aa18.37■□□□□ 0.53
HOXD4-201ENST00000306324 SIRT7Q9NRC8 400 aa18.37■□□□□ 0.53
HOXD4-201ENST00000306324 KIF25Q9UIL4 384 aa18.37■□□□□ 0.53
HOXD4-201ENST00000306324 LINC00312Q9Y6C7 94 aa18.37■□□□□ 0.53
HOXD4-201ENST00000306324 SETD2Q9BYW2 2564 aaPredicted RBP18.36■□□□□ 0.53
HOXD4-201ENST00000306324 MEIKINA0A087WXM9 373 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 TRGV10A0A0A0MS01 117 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 UBE2QL1A1L167 161 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 M0R1W7 72 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 NOL3O60936 208 aaKnown RBP18.36■□□□□ 0.53
HOXD4-201ENST00000306324 MMP9P14780 707 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 RAB6AP20340 208 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 CHATP28329 748 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 USP43Q70EL4 1123 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 C6orf201Q7Z4U5 140 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 VMO1Q7Z5L0 202 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 FAM89BQ8N5H3 189 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 TEX29Q8N6K0 151 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 Q8N7P7 452 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 OR56B1Q8NGI3 324 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 RAB2BQ8WUD1 216 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 SLC25A46Q96AG3 418 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 UPRTQ96BW1 309 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 CYYR1Q96J86 154 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 ZNF714Q96N38 554 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 TBX15Q96SF7 602 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 DCSTAMPQ9H295 470 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 ETAA1Q9NY74 926 aa18.36■□□□□ 0.53
HOXD4-201ENST00000306324 ZNF728P0DKX0 622 aa18.35■□□□□ 0.53
HOXD4-201ENST00000306324 TMBIM6P55061 237 aa18.35■□□□□ 0.53
HOXD4-201ENST00000306324 PTX4Q96A99 478 aa18.35■□□□□ 0.53
HOXD4-201ENST00000306324 PLEKHJ1Q9NW61 149 aa18.35■□□□□ 0.53
HOXD4-201ENST00000306324 IGHV3OR16-10A0A075B7F0 116 aa18.34■□□□□ 0.53
HOXD4-201ENST00000306324 TRAV40A0A0B4J280 105 aa18.34■□□□□ 0.53
HOXD4-201ENST00000306324 hCG_1809904A0A1W2PP81 198 aa18.34■□□□□ 0.53
HOXD4-201ENST00000306324 A0A1W2PPE2 198 aa18.34■□□□□ 0.53
HOXD4-201ENST00000306324 A0A1W2PR64 198 aa18.34■□□□□ 0.53
HOXD4-201ENST00000306324 A0A1W2PRV1 198 aa18.34■□□□□ 0.53
HOXD4-201ENST00000306324 TMEM30CPA0ZSE6 113 aa18.34■□□□□ 0.53
HOXD4-201ENST00000306324 CRLF1O75462 422 aa18.34■□□□□ 0.53
HOXD4-201ENST00000306324 GLAP06280 429 aa18.34■□□□□ 0.53
HOXD4-201ENST00000306324 DLX1P56177 255 aa18.34■□□□□ 0.53
HOXD4-201ENST00000306324 PAX5Q02548 391 aa18.34■□□□□ 0.53
HOXD4-201ENST00000306324 PRB3Q04118 309 aaPredicted RBP18.34■□□□□ 0.53
HOXD4-201ENST00000306324 FAM189A2Q15884 450 aa18.34■□□□□ 0.53
HOXD4-201ENST00000306324 SLC35E4Q6ICL7 350 aa18.34■□□□□ 0.53
HOXD4-201ENST00000306324 DYRK2Q92630 601 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms