RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 PPP1R14DQ9NXH3 145 aa9.41□□□□□ -0.9
ZNF558-201ENST00000301475 ADAM20O43506 726 aa9.41□□□□□ -0.9
ZNF558-201ENST00000301475 DFFBO76075 338 aa9.41□□□□□ -0.9
ZNF558-201ENST00000301475 TNFRSF4P43489 277 aa9.41□□□□□ -0.9
ZNF558-201ENST00000301475 GRB2P62993 217 aaKnown RBP9.41□□□□□ -0.9
ZNF558-201ENST00000301475 PIGYQ3MUY2 71 aa9.41□□□□□ -0.9
ZNF558-201ENST00000301475 TEX38Q6PEX7 206 aa9.41□□□□□ -0.9
ZNF558-201ENST00000301475 ADGRG7Q96K78 797 aa9.41□□□□□ -0.9
ZNF558-201ENST00000301475 SIGLEC12Q96PQ1 595 aa9.41□□□□□ -0.9
ZNF558-201ENST00000301475 ZNF160Q9HCG1 818 aa9.41□□□□□ -0.9
ZNF558-201ENST00000301475 IGKV1-27A0A075B6S5 117 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 IGHV3-20A0A0C4DH32 117 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 A0A1W2PNR3 127 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 VSTM2BA6NLU5 285 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 MPPED1O15442 326 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 FGF8P55075 233 aaPredicted RBP9.4□□□□□ -0.9
ZNF558-201ENST00000301475 TAS2R30P59541 319 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 CLN3Q13286 438 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 ZNF726P1Q15940 193 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 RSPO1Q2MKA7 263 aaPredicted RBP9.4□□□□□ -0.9
ZNF558-201ENST00000301475 MAML2Q8IZL2 1156 aaPredicted RBP9.4□□□□□ -0.9
ZNF558-201ENST00000301475 NECAP1Q8NC96 275 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 THAP3Q8WTV1 239 aaPredicted RBP9.4□□□□□ -0.9
ZNF558-201ENST00000301475 NAT6Q93015 286 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 THOC3Q96J01 351 aaKnown RBP9.4□□□□□ -0.9
ZNF558-201ENST00000301475 VSIRQ9H7M9 311 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 CISD1Q9NZ45 108 aaKnown RBP9.4□□□□□ -0.9
ZNF558-201ENST00000301475 LRFN1Q9P244 771 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 TRAV1-1A0A0B4J248 108 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 TNFSF12O43508 249 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 GCGP01275 180 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 MMP7P09237 267 aaPredicted RBP9.4□□□□□ -0.9
ZNF558-201ENST00000301475 GZMHP20718 246 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 MTCP1P56278 107 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 VAMP2P63027 116 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 PDCD1Q15116 288 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 EXT1Q16394 746 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 PRSS8Q16651 343 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 LCN15Q6UWW0 184 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 SLC25A26Q70HW3 274 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 CCDC71LQ8N9Z2 235 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 RPRMQ9NS64 109 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 LAMP3Q9UQV4 416 aa9.4□□□□□ -0.9
ZNF558-201ENST00000301475 A0A0U1RQV5 110 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 H3BP45 60 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 HLA-HP01893 362 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 PFN1P07737 140 aaKnown RBP9.39□□□□□ -0.91
ZNF558-201ENST00000301475 UCP3P55916 312 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 HERV-K104P61576 105 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 PAX5Q02548 391 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 ZNF787Q6DD87 383 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 THNSL2Q86YJ6 484 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 PLPPR1Q8TBJ4 325 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 ATP5SQ99766 215 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 RSG1Q9BU20 258 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 H3BMH7 237 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 OR2J2O76002 312 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 PPYP01298 95 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 TK1P04183 234 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 ZNF25P17030 456 aaPredicted RBP9.39□□□□□ -0.91
ZNF558-201ENST00000301475 TUBG1P23258 451 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 ERVS71-1P61550 626 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 KCNMB1Q16558 191 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 SNAI3Q3KNW1 292 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 SHISA6Q6ZSJ9 500 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 C16orf82Q7Z2V1 217 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 TDHQ8IZJ6 230 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 SELENOHQ8IZQ5 122 aaKnown RBP9.39□□□□□ -0.91
ZNF558-201ENST00000301475 GPR137CQ8N3F9 429 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 IL22RA1Q8N6P7 574 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 WFIKKN1Q96NZ8 548 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 PYGO2Q9BRQ0 406 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 LRRC61Q9BV99 259 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 SPTY2D1-AS1A0A0U1RR47 76 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 CTSSP25774 331 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 GNRHRP30968 328 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 TDGF1P3P51864 188 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 PAX9P55771 341 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 BAXQ07812 192 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 PMS2P11Q13670 270 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 CLEC12BQ2HXU8 276 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 NMSQ5H8A3 153 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 ZNF66Q6ZN08 573 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 TBC1D26Q86UD7 250 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 ZNF695Q8IW36 515 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 H1FOOQ8IZA3 346 aaPredicted RBP9.39□□□□□ -0.91
ZNF558-201ENST00000301475 POC1BQ8TC44 478 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 TMEM56Q96MV1 263 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 ELOVL1Q9BW60 279 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 ZNF286AQ9HBT8 521 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 P4HTMQ9NXG6 502 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 TMEM56-RWDD3S4R434 201 aa9.39□□□□□ -0.91
ZNF558-201ENST00000301475 IGKV1-12A0A0C4DH73 117 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 CHST1O43916 411 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 IGKV1D-12P01611 117 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 LTBRP36941 435 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 C17orf67Q0P5P2 114 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 ADIRFQ15847 76 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 HIST3H3Q16695 136 aa9.38□□□□□ -0.91
ZNF558-201ENST00000301475 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms