RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 FUT5Q11128 374 aa15.45■□□□□ 0.06
CDC42EP3-201ENST00000295324 PCGF1Q9BSM1 259 aa15.45■□□□□ 0.06
CDC42EP3-201ENST00000295324 CACNG5Q9UF02 275 aa15.45■□□□□ 0.06
CDC42EP3-201ENST00000295324 SLC25A47Q6Q0C1 308 aa15.45■□□□□ 0.06
CDC42EP3-201ENST00000295324 PIPOXQ9P0Z9 390 aa15.45■□□□□ 0.06
CDC42EP3-201ENST00000295324 ZDHHC8Q9ULC8 765 aa15.45■□□□□ 0.06
CDC42EP3-201ENST00000295324 KIF13BQ9NQT8 1826 aa15.45■□□□□ 0.06
CDC42EP3-201ENST00000295324 UBE2L5PA0A1B0GUS4 154 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 SURF2Q15527 256 aaPredicted RBP15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 OR52L2PQ8NGH6 319 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 WDR89Q96FK6 387 aaPredicted RBP15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 SOCS1O15524 211 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 AKR1C3P42330 323 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 KCNK17Q96T54 332 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 SF3B6Q9Y3B4 125 aaKnown RBP15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 DNASE2O00115 360 aaPredicted RBP15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 P2RX3P56373 397 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 ETV3LQ6ZN32 361 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 ABHD17AQ96GS6 310 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 TIMP4Q99727 224 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 IGF2P01344 180 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 SLC25A4P12235 298 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 PRDX2P32119 198 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 OR4F17Q8NGA8 305 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 NTNG2Q96CW9 530 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 GP6Q9HCN6 339 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 ELOVL5Q9NYP7 299 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 IGHV3OR15-7A0A075B7D8 119 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 FAM87AP0C7U9 286 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 CD80P33681 288 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 TMEM123Q8N131 208 aa15.44■□□□□ 0.06
CDC42EP3-201ENST00000295324 B3GALNT1O75752 331 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 ERVFRD-1P60508 538 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 HAGHQ16775 308 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 ZNF574Q6ZN55 896 aaPredicted RBP15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 CHRDL1Q9BU40 450 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 NCOR1O75376 2440 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 PPP5D1E7EU14 171 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 EFEMP2O95967 443 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 TTRP02766 147 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 CTSDP07339 412 aaPredicted RBP15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 CEBPEQ15744 281 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 PRSS53Q2L4Q9 553 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 CEACAM21Q3KPI0 293 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 PDZD11Q5EBL8 140 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 APCDD1LQ8NCL9 501 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 ZPLD1Q8TCW7 415 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 OR2V2Q96R30 315 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 PCDHGA9Q9Y5G4 932 aaKnown RBP15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 LIMS1P48059 325 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 LRRC3CA6NJW4 275 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 MGAT2Q10469 447 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 FAHD2BQ6P2I3 314 aaPredicted RBP15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 ZNF596Q8TC21 504 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 C2CD4CQ8TF44 421 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 FAHD2AQ96GK7 314 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 VPS25Q9BRG1 176 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 COA4Q9NYJ1 87 aa15.43■□□□□ 0.06
CDC42EP3-201ENST00000295324 H7BYZ3 331 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 NDUFA2O43678 99 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 OR2C1O95371 312 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 HLA-DRB3P79483 266 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 DHRS2Q13268 280 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 RPUSD3Q6P087 351 aaKnown RBP15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 R3HDM4Q96D70 268 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 MRPS18AQ9NVS2 196 aaKnown RBP15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 ZNF727A8MUV8 499 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 RPS4Y1P22090 263 aaKnown RBP15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 PPP1R1AQ13522 171 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 C11orf91Q3C1V1 193 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 GVQW1Q8N7I0 195 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 RNF122Q9H9V4 155 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 IL19Q9UHD0 177 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 UMAD1C9J7I0 102 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 MGST3O14880 152 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 RAG2P55895 527 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 ADAT3Q96EY9 351 aaPredicted RBP15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 MS4A3Q96HJ5 214 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 LSM2Q9Y333 95 aaKnown RBP15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 CDK2AP1O14519 115 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 CD37P11049 281 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 CNN1P51911 297 aaKnown RBP15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 ZBTB34Q8NCN2 500 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 PAX6P26367 422 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 SLC38A11Q08AI6 406 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 OR5I1Q13606 314 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 ZXDCQ2QGD7 858 aaPredicted RBP15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 ZNF658BQ4V348 819 aaPredicted RBP15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 FLYWCH2Q96CP2 140 aaKnown RBP15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 TMUB1Q9BVT8 246 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 CYB5R1Q9UHQ9 305 aa15.42■□□□□ 0.06
CDC42EP3-201ENST00000295324 SEMA7AO75326 666 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 OR5AC1P0C628 307 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 FAM209AQ5JX71 171 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 HSD17B10Q99714 261 aaKnown RBP15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 CTRB1P17538 263 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 ATP5J2P56134 94 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 CTRB2Q6GPI1 263 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 OR5B3Q8NH48 314 aa15.41■□□□□ 0.06
CDC42EP3-201ENST00000295324 SLC25A32Q9H2D1 315 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms