RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 PARP11Q9NR21 331 aa13.48□□□□□ -0.25
SHROOM4-201ENST00000289292 COL24A1Q17RW2 1714 aa13.48□□□□□ -0.25
SHROOM4-201ENST00000289292 SPINT1O43278 529 aa13.48□□□□□ -0.25
SHROOM4-201ENST00000289292 PAGE4O60829 102 aa13.48□□□□□ -0.25
SHROOM4-201ENST00000289292 SPINK14Q6IE38 97 aa13.48□□□□□ -0.25
SHROOM4-201ENST00000289292 C16orf82Q7Z2V1 217 aa13.48□□□□□ -0.25
SHROOM4-201ENST00000289292 OR6X1Q8NH79 312 aa13.48□□□□□ -0.25
SHROOM4-201ENST00000289292 ZNFX1Q9P2E3 1918 aaKnown RBP13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 OR10J1P30954 320 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 EIF4EBP2Q13542 120 aaPredicted RBP13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 ZNF385CQ66K41 422 aaPredicted RBP13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 UCN2Q96RP3 112 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 OR5H1A6NKK0 313 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 SYNGR2O43760 224 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 PPYP01298 95 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 PSG2P11465 335 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 MEOX1P50221 254 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 TMEM50BP56557 158 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 RPL24P83731 157 aaKnown RBP13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 RUNX1Q01196 453 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 COL11A1P12107 1806 aaPredicted RBP13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 TCTAP57738 103 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 GNB2P62879 340 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 HLA-DRB5Q30154 266 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 OR1L4Q8NGR5 311 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 IGKV1-8A0A0C4DH67 115 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 NHLRC2Q8NBF2 726 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 LRRC29Q8WV35 223 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 PGLYRP3Q96LB9 341 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 AMELYQ99218 206 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 NRIP2Q9BQI9 281 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 RCC2Q9P258 522 aaKnown RBP13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 LDLRAD3Q86YD5 345 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 M1APQ8TC57 530 aa13.47□□□□□ -0.25
SHROOM4-201ENST00000289292 TRGV5A0A0B4J1U4 118 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 LOC105371267A0A1B0GV96 52 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 MBPP02686 304 aaPredicted RBP13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 ORM2P19652 201 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 ZNF345Q14585 488 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 SLC26A10Q8NG04 563 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 OR13G1Q8NGZ3 307 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 ONECUT1Q9UBC0 465 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 KCNK7Q9Y2U2 307 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 A0A1W2PP11 408 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 NCBP2LA6PVI3 153 aaKnown RBP13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 C1QL1O75973 258 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 KLK2P20151 261 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 ATP6V0CP27449 155 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 GGTLC2Q14390 218 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 FNDC7Q5VTL7 733 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 MOB3AQ96BX8 217 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 HSD17B10Q99714 261 aaKnown RBP13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 NPIPB8E9PQR5 432 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 HLA-GP17693 338 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 MESP2Q0VG99 397 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 CYB5R2Q6BCY4 276 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 MRPL54Q6P161 138 aaKnown RBP13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 OCIAD1Q9NX40 245 aa13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 URB1O60287 2271 aaKnown RBP13.46□□□□□ -0.25
SHROOM4-201ENST00000289292 PAPPA2Q9BXP8 1791 aa13.46□□□□□ -0.26
SHROOM4-201ENST00000289292 PNRC1Q12796 327 aaPredicted RBP13.46□□□□□ -0.26
SHROOM4-201ENST00000289292 SRD5A3Q9H8P0 318 aa13.46□□□□□ -0.26
SHROOM4-201ENST00000289292 ACTL6AO96019 429 aa13.46□□□□□ -0.26
SHROOM4-201ENST00000289292 SMAD4Q13485 552 aaKnown RBP13.46□□□□□ -0.26
SHROOM4-201ENST00000289292 TMEM97Q5BJF2 176 aa13.46□□□□□ -0.26
SHROOM4-201ENST00000289292 OR5AU1Q8NGC0 362 aa13.46□□□□□ -0.26
SHROOM4-201ENST00000289292 OR1B1Q8NGR6 318 aa13.46□□□□□ -0.26
SHROOM4-201ENST00000289292 ANAPC16Q96DE5 110 aa13.46□□□□□ -0.26
SHROOM4-201ENST00000289292 NEURL1O76050 574 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 LIMS1P48059 325 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 OR4P4Q8NGL7 312 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 TBX15Q96SF7 602 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 MANBALQ9NQG1 85 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 VAX2Q9UIW0 290 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 TRGC2P03986 189 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 RHOBP62745 196 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 Q8IYB0 196 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 BCL2L2Q92843 193 aaPredicted RBP13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 ZNF764Q96H86 408 aaPredicted RBP13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 SDHCQ99643 169 aaPredicted RBP13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 CLEC5AQ9NY25 188 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 A0A1B0GV90 55 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 ZNF785A8K8V0 405 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 ZNF253O75346 499 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 HRASP01112 189 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 HTR1DP28221 377 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 MDH2P40926 338 aaKnown RBP13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 TRAT1Q6PIZ9 186 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 C9orf40Q8IXQ3 194 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 CYB561D1Q8N8Q1 229 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 SLC2A8Q9NY64 477 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 RRP8O43159 456 aaKnown RBP13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 PMELP40967 661 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 H2BFSP57053 126 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 KHDC1LQ5JSQ8 128 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 SARAFQ96BY9 339 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 SLC25A38Q96DW6 304 aa13.45□□□□□ -0.26
SHROOM4-201ENST00000289292 A0A1W2PPC1 479 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 IGFBP7Q16270 282 aa13.44□□□□□ -0.26
SHROOM4-201ENST00000289292 PRSS3P2Q8NHM4 247 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms