RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 GP2P55259 537 aaKnown RBP20.48■□□□□ 0.87
PDF-201ENST00000288022 LINC00596Q86U02 117 aa20.48■□□□□ 0.87
PDF-201ENST00000288022 UQCC2Q9BRT2 126 aa20.48■□□□□ 0.87
PDF-201ENST00000288022 BARHL1Q9BZE3 327 aa20.48■□□□□ 0.87
PDF-201ENST00000288022 PPIL3Q9H2H8 161 aaKnown RBP20.48■□□□□ 0.87
PDF-201ENST00000288022 ACOT13Q9NPJ3 140 aa20.48■□□□□ 0.87
PDF-201ENST00000288022 SESN1Q9Y6P5 492 aa20.48■□□□□ 0.87
PDF-201ENST00000288022 BTBD17A6NE02 478 aa20.47■□□□□ 0.87
PDF-201ENST00000288022 ARG1P05089 322 aa20.47■□□□□ 0.87
PDF-201ENST00000288022 UCHL1P09936 223 aa20.47■□□□□ 0.87
PDF-201ENST00000288022 SRMP19623 302 aa20.47■□□□□ 0.87
PDF-201ENST00000288022 DYNC1I2Q13409 638 aaKnown RBP20.47■□□□□ 0.87
PDF-201ENST00000288022 ATAD3CQ5T2N8 411 aa20.47■□□□□ 0.87
PDF-201ENST00000288022 GLT8D1Q68CQ7 371 aa20.47■□□□□ 0.87
PDF-201ENST00000288022 LRRTM1Q86UE6 522 aa20.47■□□□□ 0.87
PDF-201ENST00000288022 SVOPQ8N4V2 548 aa20.47■□□□□ 0.87
PDF-201ENST00000288022 SUMF2Q8NBJ7 301 aa20.47■□□□□ 0.87
PDF-201ENST00000288022 C17orf50Q8WW18 174 aa20.47■□□□□ 0.87
PDF-201ENST00000288022 DPCDQ9BVM2 203 aaPredicted RBP20.47■□□□□ 0.87
PDF-201ENST00000288022 ZNF581Q9P0T4 197 aa20.47■□□□□ 0.87
PDF-201ENST00000288022 MEIKINA0A087WXM9 373 aa20.46■□□□□ 0.87
PDF-201ENST00000288022 MRPS14O60783 128 aaKnown RBP20.46■□□□□ 0.87
PDF-201ENST00000288022 CRYBA1P05813 215 aa20.46■□□□□ 0.87
PDF-201ENST00000288022 HKR1P10072 659 aa20.46■□□□□ 0.87
PDF-201ENST00000288022 EMX1Q04741 257 aaPredicted RBP20.46■□□□□ 0.87
PDF-201ENST00000288022 TAF9Q16594 264 aa20.46■□□□□ 0.87
PDF-201ENST00000288022 MPV17LQ2QL34 196 aa20.46■□□□□ 0.87
PDF-201ENST00000288022 PRAMEF5Q5TYX0 476 aa20.46■□□□□ 0.87
PDF-201ENST00000288022 LYPD6Q86Y78 171 aa20.46■□□□□ 0.87
PDF-201ENST00000288022 CORO2AQ92828 525 aa20.46■□□□□ 0.87
PDF-201ENST00000288022 FOXRED1Q96CU9 486 aaPredicted RBP20.46■□□□□ 0.87
PDF-201ENST00000288022 BANF2Q9H503 90 aa20.46■□□□□ 0.87
PDF-201ENST00000288022 TAS2R3Q9NYW6 316 aa20.46■□□□□ 0.87
PDF-201ENST00000288022 OR6C3Q9NZP0 311 aa20.46■□□□□ 0.87
PDF-201ENST00000288022 KIF25Q9UIL4 384 aa20.46■□□□□ 0.87
PDF-201ENST00000288022 FAM181BA6NEQ2 426 aa20.45■□□□□ 0.86
PDF-201ENST00000288022 CRTAPO75718 401 aaPredicted RBP20.45■□□□□ 0.86
PDF-201ENST00000288022 GLP1RP43220 463 aa20.45■□□□□ 0.86
PDF-201ENST00000288022 KCNJ3P48549 501 aa20.45■□□□□ 0.86
PDF-201ENST00000288022 TMEM91Q6ZNR0 172 aa20.45■□□□□ 0.86
PDF-201ENST00000288022 PLPPR1Q8TBJ4 325 aa20.45■□□□□ 0.86
PDF-201ENST00000288022 NEK7Q8TDX7 302 aa20.45■□□□□ 0.86
PDF-201ENST00000288022 MRPS24Q96EL2 167 aaKnown RBP20.45■□□□□ 0.86
PDF-201ENST00000288022 YTHDF1Q9BYJ9 559 aaKnown RBP20.45■□□□□ 0.86
PDF-201ENST00000288022 TMEM133Q9H2Q1 129 aa20.45■□□□□ 0.86
PDF-201ENST00000288022 IFT22Q9H7X7 185 aa20.45■□□□□ 0.86
PDF-201ENST00000288022 MMP23AO75900 390 aa20.44■□□□□ 0.86
PDF-201ENST00000288022 ARL6IP5O75915 188 aa20.44■□□□□ 0.86
PDF-201ENST00000288022 MGMTP16455 207 aa20.44■□□□□ 0.86
PDF-201ENST00000288022 CDK2P24941 298 aa20.44■□□□□ 0.86
PDF-201ENST00000288022 GABRA5P31644 462 aa20.44■□□□□ 0.86
PDF-201ENST00000288022 FOXL1Q12952 345 aa20.44■□□□□ 0.86
PDF-201ENST00000288022 BEND2Q8NDZ0 799 aa20.44■□□□□ 0.86
PDF-201ENST00000288022 TAF15Q92804 592 aaKnown RBP eCLIP20.44■□□□□ 0.86
PDF-201ENST00000288022 SELENOIQ9C0D9 397 aa20.44■□□□□ 0.86
PDF-201ENST00000288022 ZNF729A6NN14 1252 aaPredicted RBP20.43■□□□□ 0.86
PDF-201ENST00000288022 OMGP23515 440 aa20.43■□□□□ 0.86
PDF-201ENST00000288022 COMPP49747 757 aaPredicted RBP20.43■□□□□ 0.86
PDF-201ENST00000288022 FABP5Q01469 135 aa20.43■□□□□ 0.86
PDF-201ENST00000288022 RSBN1Q5VWQ0 802 aaPredicted RBP20.43■□□□□ 0.86
PDF-201ENST00000288022 ZNF626Q68DY1 528 aa20.43■□□□□ 0.86
PDF-201ENST00000288022 OR52W1Q6IF63 320 aa20.43■□□□□ 0.86
PDF-201ENST00000288022 BRICD5Q6PL45 260 aa20.43■□□□□ 0.86
PDF-201ENST00000288022 LHFPL4Q7Z7J7 247 aa20.43■□□□□ 0.86
PDF-201ENST00000288022 ZNF565Q8N9K5 539 aa20.43■□□□□ 0.86
PDF-201ENST00000288022 TMEM104Q8NE00 496 aa20.43■□□□□ 0.86
PDF-201ENST00000288022 OR11H6Q8NGC7 330 aa20.43■□□□□ 0.86
PDF-201ENST00000288022 DYRK2Q92630 601 aa20.43■□□□□ 0.86
PDF-201ENST00000288022 FAM46BQ96A09 425 aa20.43■□□□□ 0.86
PDF-201ENST00000288022 GHRLQ9UBU3 117 aa20.43■□□□□ 0.86
PDF-201ENST00000288022 IGHV2-26A0A0B4J1V2 119 aa20.42■□□□□ 0.86
PDF-201ENST00000288022 ODF3BA8MYP8 253 aa20.42■□□□□ 0.86
PDF-201ENST00000288022 GPR137BO60478 399 aa20.42■□□□□ 0.86
PDF-201ENST00000288022 PAX6P26367 422 aa20.42■□□□□ 0.86
PDF-201ENST00000288022 SSX1Q16384 188 aa20.42■□□□□ 0.86
PDF-201ENST00000288022 AWAT1Q58HT5 328 aa20.42■□□□□ 0.86
PDF-201ENST00000288022 HEPN1Q6WQI6 88 aa20.42■□□□□ 0.86
PDF-201ENST00000288022 SPARTQ8N0X7 666 aa20.42■□□□□ 0.86
PDF-201ENST00000288022 AJUBAQ96IF1 538 aa20.42■□□□□ 0.86
PDF-201ENST00000288022 SSX3Q99909 188 aa20.42■□□□□ 0.86
PDF-201ENST00000288022 CLEC7AQ9BXN2 247 aa20.42■□□□□ 0.86
PDF-201ENST00000288022 CST11Q9H112 138 aa20.42■□□□□ 0.86
PDF-201ENST00000288022 SPACA1Q9HBV2 294 aa20.42■□□□□ 0.86
PDF-201ENST00000288022 TBL2Q9Y4P3 447 aaKnown RBP20.42■□□□□ 0.86
PDF-201ENST00000288022 LRRC42Q9Y546 428 aa20.42■□□□□ 0.86
PDF-201ENST00000288022 FAM172BPA6NC97 362 aa20.41■□□□□ 0.86
PDF-201ENST00000288022 UBBP0CG47 229 aa20.41■□□□□ 0.86
PDF-201ENST00000288022 CALRP27797 417 aaKnown RBP20.41■□□□□ 0.86
PDF-201ENST00000288022 C1orf100Q5SVJ3 147 aa20.41■□□□□ 0.86
PDF-201ENST00000288022 C3orf56Q8N813 242 aa20.41■□□□□ 0.86
PDF-201ENST00000288022 OR13A1Q8NGR1 328 aa20.41■□□□□ 0.86
PDF-201ENST00000288022 OR5R1Q8NH85 324 aa20.41■□□□□ 0.86
PDF-201ENST00000288022 NCOR1P1Q9H4R4 102 aa20.41■□□□□ 0.86
PDF-201ENST00000288022 VPREB3Q9UKI3 123 aa20.41■□□□□ 0.86
PDF-201ENST00000288022 TMEM30CPA0ZSE6 113 aa20.4■□□□□ 0.86
PDF-201ENST00000288022 MCRIP1C9JLW8 97 aa20.4■□□□□ 0.86
PDF-201ENST00000288022 H3BUX3 64 aa20.4■□□□□ 0.86
PDF-201ENST00000288022 MPIG6BO95866 241 aa20.4■□□□□ 0.86
PDF-201ENST00000288022 PSMB9P28065 219 aa20.4■□□□□ 0.86
PDF-201ENST00000288022 HTR2CP28335 458 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 252.8 ms