RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 A0A0B4J293 547 aa14.51□□□□□ -0.09
SH3RF1-201ENST00000284637 WDR73Q6P4I2 378 aa14.51□□□□□ -0.09
SH3RF1-201ENST00000284637 OR10AD1Q8NGE0 317 aa14.51□□□□□ -0.09
SH3RF1-201ENST00000284637 CIDEAO60543 219 aa14.51□□□□□ -0.09
SH3RF1-201ENST00000284637 LEMD1Q68G75 181 aa14.51□□□□□ -0.09
SH3RF1-201ENST00000284637 EIF4E3Q8N5X7 224 aaKnown RBP14.51□□□□□ -0.09
SH3RF1-201ENST00000284637 ZPLD1Q8TCW7 415 aa14.51□□□□□ -0.09
SH3RF1-201ENST00000284637 GSX1Q9H4S2 264 aaPredicted RBP14.51□□□□□ -0.09
SH3RF1-201ENST00000284637 ST6GALNAC2Q9UJ37 374 aa14.51□□□□□ -0.09
SH3RF1-201ENST00000284637 CARHSP1Q9Y2V2 147 aaKnown RBP14.51□□□□□ -0.09
SH3RF1-201ENST00000284637 SCN3AQ9NY46 2000 aa14.51□□□□□ -0.09
SH3RF1-201ENST00000284637 A0A1W2PPV9 198 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 VSIG8P0DPA2 414 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 ZFP36L2P47974 494 aaKnown RBP14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 FAM3BP58499 235 aaPredicted RBP14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 NANOS3P60323 173 aaKnown RBP14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 ZNF207O43670 478 aaKnown RBP14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 ZNF880Q6PDB4 577 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 TP53RKQ96S44 253 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 VAX2Q9UIW0 290 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 APC2O95996 2303 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 GAPDHP04406 335 aaKnown RBP14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 ELOBQ15370 118 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 RFLNBQ8N5W9 214 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 VN1R17PQ8TDU5 208 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 ATP5SQ99766 215 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 HSF4Q9ULV5 492 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 TRPM6Q9BX84 2022 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 SYNGR2O43760 224 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 CAMPP49913 170 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 GAMTQ14353 236 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 KHDC3LQ587J8 217 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 LYZL2Q7Z4W2 148 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 OR6X1Q8NH79 312 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 MRGPRDQ8TDS7 321 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 CABIN1Q9Y6J0 2220 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 OPRK1P41145 380 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 P4HTMQ9NXG6 502 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 NAGKQ9UJ70 344 aa14.5□□□□□ -0.09
SH3RF1-201ENST00000284637 ARAP2Q8WZ64 1704 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 BMPR1BO00238 502 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 EML2O95834 649 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 H2BFSP57053 126 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 DEFB109BQ30KR1 87 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 OR2T6Q8NHC8 308 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 BCL2L2Q92843 193 aaPredicted RBP14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 NHSQ6T4R5 1651 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 TRGV5A0A0B4J1U4 118 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 MNX1P50219 401 aaPredicted RBP14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 MOB3BQ86TA1 216 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 MOB3AQ96BX8 217 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 ANGPTL4Q9BY76 406 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 NPDC1Q9NQX5 325 aaPredicted RBP14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 SLC45A2Q9UMX9 530 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 SLC25A5P05141 298 aaKnown RBP14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 PNLIPP16233 465 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 COX19Q49B96 90 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 TMEM147Q9BVK8 224 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 VSIG4Q9Y279 399 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 CYR61O00622 381 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 ZNF253O75346 499 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 GAPTQ8N292 157 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 PARD6GQ9BYG4 376 aaPredicted RBP14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 STARD10Q9Y365 291 aa14.49□□□□□ -0.09
SH3RF1-201ENST00000284637 RBP4P02753 201 aa14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 BTNL3Q6UXE8 466 aa14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 RNF24Q9Y225 148 aa14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 HLA-GP17693 338 aa14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 VDAC1P21796 283 aa14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 FCARP24071 287 aa14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 RHOBP62745 196 aa14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 OR1P1Q8NH06 330 aa14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 TUBGCP6Q96RT7 1819 aa14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 TEX50A0A1B0GTY4 177 aa14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 RCC1P18754 421 aaPredicted RBP14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 BLNKQ8WV28 456 aa14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 SF3B6Q9Y3B4 125 aaKnown RBP14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 ADAMTSL3P82987 1691 aa14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 LIPT2A6NK58 231 aa14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 TCL1AP56279 114 aa14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 SLX1AQ9BQ83 275 aa14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 CCL28Q9NRJ3 127 aa14.48□□□□□ -0.09
SH3RF1-201ENST00000284637 PPYP01298 95 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 PAFAH1B2P68402 229 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 SMAD4Q13485 552 aaKnown RBP14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 VMA21Q3ZAQ7 101 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 OR1L4Q8NGR5 311 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 MISP3Q96FF7 219 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 CBLN4Q9NTU7 201 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 OR1A1Q9P1Q5 309 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 KCNE5Q9UJ90 142 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 KLHDC2Q9Y2U9 406 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 ASXL3Q9C0F0 2248 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 RPEL1Q2QD12 228 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 HLA-DRB5Q30154 266 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 SHISA7A6NL88 538 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 EWSR1Q01844 656 aaKnown RBP eCLIP14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 NHLH1Q02575 133 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 IGFBP7Q16270 282 aa14.47□□□□□ -0.09
SH3RF1-201ENST00000284637 SPNS3Q6ZMD2 512 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms