RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 SHPKQ9UHJ6 478 aa17.75■□□□□ 0.43
YBX3-202ENST00000279550 NKX2-6A6NCS4 301 aa17.75■□□□□ 0.43
YBX3-202ENST00000279550 ADAP1O75689 374 aa17.75■□□□□ 0.43
YBX3-202ENST00000279550 GRPP07492 148 aa17.75■□□□□ 0.43
YBX3-202ENST00000279550 ZNF728P0DKX0 622 aa17.75■□□□□ 0.43
YBX3-202ENST00000279550 ECI1P42126 302 aa17.75■□□□□ 0.43
YBX3-202ENST00000279550 NAAAQ02083 359 aa17.75■□□□□ 0.43
YBX3-202ENST00000279550 Q6ZS49 121 aa17.75■□□□□ 0.43
YBX3-202ENST00000279550 TMUB2Q71RG4 321 aa17.75■□□□□ 0.43
YBX3-202ENST00000279550 SSX8Q7RTT4 187 aa17.75■□□□□ 0.43
YBX3-202ENST00000279550 RDH5Q92781 318 aa17.75■□□□□ 0.43
YBX3-202ENST00000279550 CLEC4MQ9H2X3 399 aaPredicted RBP17.75■□□□□ 0.43
YBX3-202ENST00000279550 TMEM100Q9NV29 134 aa17.75■□□□□ 0.43
YBX3-202ENST00000279550 CDIPTO14735 213 aa17.74■□□□□ 0.43
YBX3-202ENST00000279550 HS3ST1O14792 307 aa17.74■□□□□ 0.43
YBX3-202ENST00000279550 TPD52L2O43399 206 aaKnown RBP17.74■□□□□ 0.43
YBX3-202ENST00000279550 KITLGP21583 273 aa17.74■□□□□ 0.43
YBX3-202ENST00000279550 FABP6P51161 128 aa17.74■□□□□ 0.43
YBX3-202ENST00000279550 FXYD4P59646 89 aa17.74■□□□□ 0.43
YBX3-202ENST00000279550 GMFBP60983 142 aa17.74■□□□□ 0.43
YBX3-202ENST00000279550 MSMPQ1L6U9 139 aa17.74■□□□□ 0.43
YBX3-202ENST00000279550 ZNF843Q8N446 348 aa17.74■□□□□ 0.43
YBX3-202ENST00000279550 RNASE6Q93091 150 aaKnown RBP17.74■□□□□ 0.43
YBX3-202ENST00000279550 NRIP2Q9BQI9 281 aa17.74■□□□□ 0.43
YBX3-202ENST00000279550 BCL2L14Q9BZR8 327 aa17.74■□□□□ 0.43
YBX3-202ENST00000279550 RDH8Q9NYR8 311 aa17.74■□□□□ 0.43
YBX3-202ENST00000279550 C13orf42A0A1B0GVH6 325 aa17.73■□□□□ 0.43
YBX3-202ENST00000279550 M0R233 179 aa17.73■□□□□ 0.43
YBX3-202ENST00000279550 TIMM8AO60220 97 aaPredicted RBP17.73■□□□□ 0.43
YBX3-202ENST00000279550 PGA5P0DJD9 388 aa17.73■□□□□ 0.43
YBX3-202ENST00000279550 AADACP22760 399 aa17.73■□□□□ 0.43
YBX3-202ENST00000279550 LRRC37A5PQ49AS3 106 aa17.73■□□□□ 0.43
YBX3-202ENST00000279550 UNQ6126/PRO20091Q6UXV3 157 aa17.73■□□□□ 0.43
YBX3-202ENST00000279550 MRPL30Q8TCC3 161 aaKnown RBP17.73■□□□□ 0.43
YBX3-202ENST00000279550 PPP1R1CQ8WVI7 109 aa17.73■□□□□ 0.43
YBX3-202ENST00000279550 C5orf51A6NDU8 294 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 THBDP07204 575 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 SCTP09683 121 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 C20orf204Q6ZNR8 217 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 C11orf53Q8IXP5 236 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 COQ8AQ8NI60 647 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 MOB3AQ96BX8 217 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 DHRS9Q9BPW9 319 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 IFT22Q9H7X7 185 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 SPACA1Q9HBV2 294 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 KCNJ16Q9NPI9 418 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 CRYM-AS1A6NIL9 109 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 TMEM210A6NLX4 147 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 MPTX1A8MV57 137 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 DEGS1O15121 323 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 CRYAAP02489 173 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 GLP1RP43220 463 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 EXOSC2Q13868 293 aaKnown RBP17.72■□□□□ 0.43
YBX3-202ENST00000279550 SRSF7Q16629 238 aaKnown RBP eCLIP17.72■□□□□ 0.43
YBX3-202ENST00000279550 ZNF718Q3SXZ3 478 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 MBNL2Q5VZF2 373 aaKnown RBP17.72■□□□□ 0.43
YBX3-202ENST00000279550 GSG1LQ6UXU4 331 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 LRRC46Q96FV0 321 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 FAM210AQ96ND0 272 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 WFIKKN1Q96NZ8 548 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 RHOFQ9HBH0 211 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 RAB18Q9NP72 206 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 POLDIP2Q9Y2S7 368 aa17.72■□□□□ 0.43
YBX3-202ENST00000279550 CFAP46Q8IYW2 2715 aa17.71■□□□□ 0.43
YBX3-202ENST00000279550 C1QL1O75973 258 aa17.71■□□□□ 0.43
YBX3-202ENST00000279550 SLC25A4P12235 298 aa17.71■□□□□ 0.43
YBX3-202ENST00000279550 RPA2P15927 270 aa17.71■□□□□ 0.43
YBX3-202ENST00000279550 TUBG1P23258 451 aa17.71■□□□□ 0.43
YBX3-202ENST00000279550 S100A11P31949 105 aa17.71■□□□□ 0.43
YBX3-202ENST00000279550 HOXA4Q00056 320 aaPredicted RBP17.71■□□□□ 0.43
YBX3-202ENST00000279550 HERPUD1Q15011 391 aa17.71■□□□□ 0.43
YBX3-202ENST00000279550 ZNF826PQ6ZT77 177 aa17.71■□□□□ 0.43
YBX3-202ENST00000279550 WFDC8Q8IUA0 241 aa17.71■□□□□ 0.43
YBX3-202ENST00000279550 GTF3AQ92664 365 aaKnown RBP17.71■□□□□ 0.43
YBX3-202ENST00000279550 MFFQ9GZY8 342 aa17.71■□□□□ 0.43
YBX3-202ENST00000279550 CXXC4Q9H2H0 198 aa17.71■□□□□ 0.43
YBX3-202ENST00000279550 MSL2Q9HCI7 577 aa17.71■□□□□ 0.43
YBX3-202ENST00000279550 TUBG2Q9NRH3 451 aa17.71■□□□□ 0.43
YBX3-202ENST00000279550 IGKV1-6A0A0C4DH72 117 aa17.7■□□□□ 0.42
YBX3-202ENST00000279550 SIRPB1O00241 398 aa17.7■□□□□ 0.42
YBX3-202ENST00000279550 IFNA2P01563 188 aa17.7■□□□□ 0.42
YBX3-202ENST00000279550 ZNF44P15621 663 aa17.7■□□□□ 0.42
YBX3-202ENST00000279550 GRNP28799 593 aaKnown RBP17.7■□□□□ 0.42
YBX3-202ENST00000279550 GCH1P30793 250 aa17.7■□□□□ 0.42
YBX3-202ENST00000279550 PIGPP57054 158 aa17.7■□□□□ 0.42
YBX3-202ENST00000279550 FGL1Q08830 312 aa17.7■□□□□ 0.42
YBX3-202ENST00000279550 PRAMEF6Q5VXH4 476 aa17.7■□□□□ 0.42
YBX3-202ENST00000279550 C11orf87Q6NUJ2 197 aa17.7■□□□□ 0.42
YBX3-202ENST00000279550 COMMD9Q9P000 198 aa17.7■□□□□ 0.42
YBX3-202ENST00000279550 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.69■□□□□ 0.42
YBX3-202ENST00000279550 TEX13DA0A0J9YY54 714 aaPredicted RBP17.69■□□□□ 0.42
YBX3-202ENST00000279550 TRDCB7Z8K6 153 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 ZG16O60844 167 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 NXPH2O95156 264 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 OR2H2O95918 312 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 GLAP06280 429 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 CD40P25942 277 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 ATXN7L3Q14CW9 347 aaPredicted RBP17.69■□□□□ 0.42
YBX3-202ENST00000279550 PHLDA2Q53GA4 152 aa17.69■□□□□ 0.42
YBX3-202ENST00000279550 TMEM65Q6PI78 240 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms