RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 TMPRSS13Q9BYE2 586 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.07□□□□□ -1.282e-6■■■■□ 22.8
LIMD1-201ENST00000273317 CRHP06850 196 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 LYZP61626 148 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 DEFB109BQ30KR1 87 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 GFRALQ6UXV0 394 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 MRGPRGQ86SM5 289 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 LYG1Q8N1E2 194 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 ADAMTSL1Q8N6G6 1762 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 CA11O75493 328 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 GFERP55789 205 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 SCGB1D4Q6XE38 83 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 TBC1D26Q86UD7 250 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 WASHC3Q9Y3C0 194 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 CORTO00230 105 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 BMPR1BO00238 502 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 RER1O15258 196 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 TNFSF15O95150 251 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 CDS2O95674 445 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 FGF8P55075 233 aaPredicted RBP7.07□□□□□ -1.28
LIMD1-201ENST00000273317 WNT3P56703 355 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 COL19A1Q14993 1142 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 LSMEM1Q8N8F7 131 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 SF3B5Q9BWJ5 86 aaKnown RBP7.07□□□□□ -1.28
LIMD1-201ENST00000273317 WNK1Q9H4A3 2382 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 FAM3BP58499 235 aaPredicted RBP7.07□□□□□ -1.28
LIMD1-201ENST00000273317 OR4D9Q8NGE8 314 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 RAB1BQ9H0U4 201 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 CDC42EP3Q9UKI2 254 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 LSM6P62312 80 aaKnown RBP7.07□□□□□ -1.28
LIMD1-201ENST00000273317 PABPC1L2AQ5JQF8 200 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 ZNF788Q6ZQV5 615 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 LRRC3BQ96PB8 259 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 HSD17B10Q99714 261 aaKnown RBP7.07□□□□□ -1.28
LIMD1-201ENST00000273317 PRDM7Q9NQW5 492 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 AP5S1Q9NUS5 200 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 CLEC5AQ9NY25 188 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 NAGKQ9UJ70 344 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 G6PCP35575 357 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 RPL29P47914 159 aaKnown RBP7.07□□□□□ -1.28
LIMD1-201ENST00000273317 TMEM65Q6PI78 240 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 MSRB3Q8IXL7 192 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 C1orf174Q8IYL3 243 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 OR5AU1Q8NGC0 362 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 LRRC29Q8WV35 223 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 PTX4Q96A99 478 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 CXCL16Q9H2A7 254 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 CNTD2Q9H8S5 307 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 ZFP30Q9Y2G7 519 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 TRAV38-1A0A0B4J264 116 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 DNASE2O00115 360 aaPredicted RBP7.07□□□□□ -1.28
LIMD1-201ENST00000273317 NAT2P11245 290 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 CCL7P80098 99 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 ANKRD37Q7Z713 158 aa7.07□□□□□ -1.28
LIMD1-201ENST00000273317 RBM38Q9H0Z9 239 aaKnown RBP7.07□□□□□ -1.28
LIMD1-201ENST00000273317 OGG1O15527 345 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 B4GALNT1Q00973 533 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 SARGQ9BW04 601 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 MRPL37Q9BZE1 423 aaKnown RBP7.06□□□□□ -1.28
LIMD1-201ENST00000273317 LTB4R2Q9NPC1 389 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 PCDHGA9Q9Y5G4 932 aaKnown RBP7.06□□□□□ -1.28
LIMD1-201ENST00000273317 A0A1W2PQD3 144 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 LINC00862A6NCI5 91 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 SMPD2O60906 423 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 HIST3H3Q16695 136 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 R3HDM4Q96D70 268 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 TBX21Q9UL17 535 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 DLK1P80370 383 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 SP6Q3SY56 376 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 ABHD14BQ96IU4 210 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 SNX22Q96L94 193 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 TXNDC17Q9BRA2 123 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 IL17BQ9UHF5 180 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 CTXND1A0A1B0GTU2 59 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 ERVS71-1P61550 626 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 TUSC1Q2TAM9 212 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 DMKNQ6E0U4 476 aaPredicted RBP7.06□□□□□ -1.28
LIMD1-201ENST00000273317 ZNF547Q8IVP9 402 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 ST6GAL2Q96JF0 529 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 CES1P1Q9UKY3 287 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 KCNE3Q9Y6H6 103 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 SPRY3O43610 288 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 MMP9P14780 707 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 HMGCLL1Q8TB92 370 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 DIRC2Q96SL1 478 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 GPX7Q96SL4 187 aaPredicted RBP7.06□□□□□ -1.28
LIMD1-201ENST00000273317 GEMIN2O14893 280 aaKnown RBP7.06□□□□□ -1.28
LIMD1-201ENST00000273317 SRSF10O75494 262 aaKnown RBP7.06□□□□□ -1.28
LIMD1-201ENST00000273317 VDAC1P21796 283 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 SRD5A2P31213 254 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 RBM11P57052 281 aaKnown RBP7.06□□□□□ -1.28
LIMD1-201ENST00000273317 DHRS13Q6UX07 377 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 SFTPA2Q8IWL1 248 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 SFTPA1Q8IWL2 248 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 SPOCK3Q9BQ16 436 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 GPR27Q9NS67 375 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 KLF7O75840 302 aaPredicted RBP7.06□□□□□ -1.28
LIMD1-201ENST00000273317 CA6P23280 308 aa7.06□□□□□ -1.28
LIMD1-201ENST00000273317 LGALS7P47929 136 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms