RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 CATSPERDQ86XM0 798 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 CPT1CQ8TCG5 803 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 URM1Q9BTM9 101 aaKnown RBP12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 OBP2BQ9NPH6 170 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 TNFSF18Q9UNG2 199 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ABCA12Q86UK0 2595 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 A0A1B0GWJ7 208 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 RAB40ALP0C0E4 278 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 CA6P23280 308 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ERVS71-1P61550 626 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 NHLH2Q02577 135 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 C15orf40Q8WUR7 153 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 RAB40AQ8WXH6 277 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 GPX7Q96SL4 187 aaPredicted RBP12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 KCNS2Q9ULS6 477 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 USP9XQ93008 2570 aaPredicted RBP12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 MSGN1A6NI15 193 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 VAMP2P63027 116 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SSPNQ14714 243 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 RPL7L1Q6DKI1 246 aaKnown RBP12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ADAD2Q8NCV1 583 aaKnown RBP12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 TTTY12Q9BZ98 90 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SLC7A11Q9UPY5 501 aa12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SMG1Q96Q15 3661 aaKnown RBP12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ASH1LQ9NR48 2969 aaKnown RBP12.3□□□□□ -0.44
TNFRSF11A-201ENST00000269485 GEMIN2O14893 280 aaKnown RBP12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 LDLRAD4O15165 306 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 HEXAP06865 529 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 HIST1H1BP16401 226 aaKnown RBP12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 CDX1P47902 265 aaPredicted RBP12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 RAC1P63000 192 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 EDDM3AQ14507 147 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ZNF766Q5HY98 468 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 LY6G6FQ5SQ64 297 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 OR1J1Q8NGS3 322 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 TERB2Q8NHR7 220 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 RFESDQ8TAC1 157 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 METTL9Q9H1A3 318 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 CARHSP1Q9Y2V2 147 aaKnown RBP12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 DIRAS3O95661 229 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SERPINA7P05543 415 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 HNF1AP20823 631 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 BMP5P22003 454 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 LSM6P62312 80 aaKnown RBP12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ZNF239Q16600 458 aaKnown RBP12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 NUFIP2Q7Z417 695 aaKnown RBP12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 BIVMQ86UB2 503 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 HSD17B11Q8NBQ5 300 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 OR2M7Q8NG81 312 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 RNF150Q9ULK6 438 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 HSF4Q9ULV5 492 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 RCL1Q9Y2P8 373 aaKnown RBP12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 HDGFL3Q9Y3E1 203 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 OR5H1A6NKK0 313 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 XRCC2O43543 280 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ACTBP60709 375 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ACTG1P63261 375 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 DHODHQ02127 395 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ZNF92Q03936 586 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 CLN3Q13286 438 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 EXD3Q8N9H8 876 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 PHYHIPLQ96FC7 376 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 LRFN5Q96NI6 719 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 CST11Q9H112 138 aa12.29□□□□□ -0.44
TNFRSF11A-201ENST00000269485 AQP7P3A6NL99 342 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SEC14L6B5MCN3 397 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 PPP1R1AQ13522 171 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 MIDNQ504T8 468 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 KHDC3LQ587J8 217 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 IL34Q6ZMJ4 242 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SLC43A2Q8N370 569 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 PSMF1Q92530 271 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 G6PC2Q9NQR9 355 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SIRPB1O00241 398 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 XRCC3O43542 346 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 TRGC2P03986 189 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 FGF7P21781 194 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 CAV2P51636 162 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 PSG4Q00888 419 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 GGTLC2Q14390 218 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 UBE2V2Q15819 145 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SLC36A1Q7Z2H8 476 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 SLC30A7Q8NEW0 376 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 OR51H1Q8NH63 302 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 FAM213BQ8TBF2 198 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 MSL2Q9HCI7 577 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 LPAR3Q9UBY5 353 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 KLK13Q9UKR3 277 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 ST3GAL6Q9Y274 331 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 GSTZ1O43708 216 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 NRASP01111 189 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 NPSP0C0P6 89 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 TDGF1P13385 188 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 CEBPDP49716 269 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 TNFRSF9Q07011 255 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 NCR3LG1Q68D85 454 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 RNF133Q8WVZ7 376 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 VPS25Q9BRG1 176 aa12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 MRPL37Q9BZE1 423 aaKnown RBP12.28□□□□□ -0.44
TNFRSF11A-201ENST00000269485 PRDM13Q9H4Q3 707 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms