RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 RBKSQ9H477 322 aa14.22□□□□□ -0.13
GPC1-201ENST00000264039 PLXNB3Q9ULL4 1909 aa14.21□□□□□ -0.13
GPC1-201ENST00000264039 LDLRAD4O15165 306 aa14.21□□□□□ -0.13
GPC1-201ENST00000264039 WDR1O75083 606 aa14.21□□□□□ -0.13
GPC1-201ENST00000264039 GCGP01275 180 aa14.21□□□□□ -0.13
GPC1-201ENST00000264039 CSRP1P21291 193 aaKnown RBP14.21□□□□□ -0.13
GPC1-201ENST00000264039 FDX2Q6P4F2 183 aa14.21□□□□□ -0.13
GPC1-201ENST00000264039 GPBAR1Q8TDU6 330 aa14.21□□□□□ -0.13
GPC1-201ENST00000264039 TM4SF19Q96DZ7 209 aa14.21□□□□□ -0.13
GPC1-201ENST00000264039 CIB3Q96Q77 187 aaPredicted RBP14.21□□□□□ -0.13
GPC1-201ENST00000264039 SERTAD4Q9NUC0 356 aa14.21□□□□□ -0.13
GPC1-201ENST00000264039 PPP1R3CQ9UQK1 317 aa14.21□□□□□ -0.13
GPC1-201ENST00000264039 K7N7A8 449 aa14.21□□□□□ -0.13
GPC1-201ENST00000264039 ZNF133P52736 654 aaPredicted RBP14.21□□□□□ -0.13
GPC1-201ENST00000264039 ERVFC1-1P60608 527 aa14.21□□□□□ -0.13
GPC1-201ENST00000264039 HTD2P86397 168 aa14.21□□□□□ -0.13
GPC1-201ENST00000264039 PNRC1Q12796 327 aaPredicted RBP14.21□□□□□ -0.13
GPC1-201ENST00000264039 NOGQ13253 232 aa14.21□□□□□ -0.13
GPC1-201ENST00000264039 TBC1D26Q86UD7 250 aa14.21□□□□□ -0.13
GPC1-201ENST00000264039 OR4C5Q8NGB2 326 aa14.21□□□□□ -0.13
GPC1-201ENST00000264039 CMTM2Q8TAZ6 248 aa14.21□□□□□ -0.13
GPC1-201ENST00000264039 TP53RKQ96S44 253 aa14.21□□□□□ -0.13
GPC1-201ENST00000264039 ABCA1O95477 2261 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 M0R135 149 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 DLEU1O43261 78 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 ZNF90Q03938 601 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 TEX38Q6PEX7 206 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 WDR5BQ86VZ2 330 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 RDH5Q92781 318 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 ZNF799Q96GE5 643 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 HSPB9Q9BQS6 159 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 PLXNA3P51805 1871 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 SMIM10L1P0DMW3 83 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 FBLP22087 321 aaKnown RBP14.2□□□□□ -0.14
GPC1-201ENST00000264039 CNN1P51911 297 aaKnown RBP14.2□□□□□ -0.14
GPC1-201ENST00000264039 GTF3C1Q12789 2109 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 LHX8Q68G74 356 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 Q6ZN92 141 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 SMIM10Q96HG1 83 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 FAM206AQ9NX38 181 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 MDFIC2A0A1B0GVS7 189 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 SHISA7A6NL88 538 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 HS3ST1O14792 307 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 IGHV3-9P01782 118 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 MPZP25189 248 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 TRA2AQ13595 282 aaKnown RBP eCLIP14.2□□□□□ -0.14
GPC1-201ENST00000264039 SLC25A26Q70HW3 274 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 OR5AS1Q8N127 324 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 BOD1Q96IK1 185 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 ARV1Q9H2C2 271 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 CUTCQ9NTM9 273 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 PSENENQ9NZ42 101 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 ZNF319Q9P2F9 582 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 VCANP13611 3396 aa14.2□□□□□ -0.14
GPC1-201ENST00000264039 LRRC3CA6NJW4 275 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 IRF2P14316 349 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 THBS4P35443 961 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 HNRNPA3P51991 378 aaKnown RBP14.19□□□□□ -0.14
GPC1-201ENST00000264039 HBG1P69891 147 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 HBG2P69892 147 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.19□□□□□ -0.14
GPC1-201ENST00000264039 DEGS2Q6QHC5 323 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 SPTSSAQ969W0 71 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 RIMS4Q9H426 269 aaPredicted RBP14.19□□□□□ -0.14
GPC1-201ENST00000264039 ZNF581Q9P0T4 197 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 A0A1W2PPV4 95 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 MARCH11A6NNE9 402 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 MPPED1O15442 326 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 OR10J1P30954 320 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 SUMO1P63165 101 aaKnown RBP14.19□□□□□ -0.14
GPC1-201ENST00000264039 ACOT6Q3I5F7 207 aaPredicted RBP14.19□□□□□ -0.14
GPC1-201ENST00000264039 CCNL2Q96S94 520 aaPredicted RBP14.19□□□□□ -0.14
GPC1-201ENST00000264039 TRAV39A0A0B4J263 110 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 KIAA1324LA8MWY0 1029 aaPredicted RBP14.19□□□□□ -0.14
GPC1-201ENST00000264039 B4DEV8 164 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 H0Y8G0 127 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 SPINK9Q5DT21 86 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 ATOH7Q8N100 152 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 GAPTQ8N292 157 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 SIGLECL1Q8N7X8 197 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 Q9N2K0 584 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 GCM1Q9NP62 436 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 NAT8Q9UHE5 227 aa14.19□□□□□ -0.14
GPC1-201ENST00000264039 TUSC2O75896 110 aa14.18□□□□□ -0.14
GPC1-201ENST00000264039 KITLGP21583 273 aa14.18□□□□□ -0.14
GPC1-201ENST00000264039 DEFB133Q30KQ1 61 aa14.18□□□□□ -0.14
GPC1-201ENST00000264039 BMFQ96LC9 184 aa14.18□□□□□ -0.14
GPC1-201ENST00000264039 ULBP2Q9BZM5 246 aa14.18□□□□□ -0.14
GPC1-201ENST00000264039 TMEM9BQ9NQ34 198 aa14.18□□□□□ -0.14
GPC1-201ENST00000264039 SLC7A10Q9NS82 523 aa14.18□□□□□ -0.14
GPC1-201ENST00000264039 ISG15P05161 165 aa14.18□□□□□ -0.14
GPC1-201ENST00000264039 HINT1P49773 126 aaPredicted RBP14.18□□□□□ -0.14
GPC1-201ENST00000264039 TMEM187Q14656 261 aa14.18□□□□□ -0.14
GPC1-201ENST00000264039 TMEM183BQ1AE95 376 aa14.18□□□□□ -0.14
GPC1-201ENST00000264039 OR5R1Q8NH85 324 aa14.18□□□□□ -0.14
GPC1-201ENST00000264039 ASB10Q8WXI3 467 aa14.18□□□□□ -0.14
GPC1-201ENST00000264039 ERRFI1Q9UJM3 462 aaPredicted RBP14.18□□□□□ -0.14
GPC1-201ENST00000264039 FOXS1O43638 330 aa14.18□□□□□ -0.14
GPC1-201ENST00000264039 HNRNPKP61978 463 aaKnown RBP eCLIP14.18□□□□□ -0.14
GPC1-201ENST00000264039 PPP1CBP62140 327 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms