RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 PAN3Q58A45 887 aaKnown RBP12.94□□□□□ -0.34
USE1-201ENST00000263897 TMEM219Q86XT9 240 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 ZNF565Q8N9K5 539 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 OR4D6Q8NGJ1 314 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 OR13C5Q8NGS8 318 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 ZNF596Q8TC21 504 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 FBLIM1Q8WUP2 373 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 ORAI1Q96D31 301 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 NKX3-1Q99801 234 aaPredicted RBP12.94□□□□□ -0.34
USE1-201ENST00000263897 BARHL1Q9BZE3 327 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 PPIL3Q9H2H8 161 aaKnown RBP12.94□□□□□ -0.34
USE1-201ENST00000263897 PLCXD1Q9NUJ7 323 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 CNOT2Q9NZN8 540 aaKnown RBP12.94□□□□□ -0.34
USE1-201ENST00000263897 ING4Q9UNL4 249 aa12.94□□□□□ -0.34
USE1-201ENST00000263897 KBTBD11-OT1A0A1B0GTJ5 212 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 ANKRD65E5RJM6 399 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 F2RL2O00254 374 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 WIPF1O43516 503 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 XPNPEP2O43895 674 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 IGLV1-47P01700 117 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 IGFBP3P17936 291 aaPredicted RBP12.93□□□□□ -0.34
USE1-201ENST00000263897 BDKRB2P30411 391 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 RPS11P62280 158 aaKnown RBP eCLIP12.93□□□□□ -0.34
USE1-201ENST00000263897 PIGYQ3MUY2 71 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 Q499Y3 187 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 YIF1BQ5BJH7 314 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 DDI2Q5TDH0 399 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 Q6ZTK2 550 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 Q8N2B8 174 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 ZFP41Q8N8Y5 198 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 FAM192AQ9GZU8 254 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 METTL9Q9H1A3 318 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 ZNF702PQ9H963 129 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 ZNF286AQ9HBT8 521 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 IL36GQ9NZH8 169 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 PSORS1C1Q9UIG5 152 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 KIF25Q9UIL4 384 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 FOXJ3Q9UPW0 622 aa12.93□□□□□ -0.34
USE1-201ENST00000263897 TET2Q6N021 2002 aaPredicted RBP12.93□□□□□ -0.34
USE1-201ENST00000263897 MEIKINA0A087WXM9 373 aa12.92□□□□□ -0.34
USE1-201ENST00000263897 A0A087X0M5 115 aa12.92□□□□□ -0.34
USE1-201ENST00000263897 A0A1B0GX30 115 aa12.92□□□□□ -0.34
USE1-201ENST00000263897 LEUTXA8MZ59 168 aa12.92□□□□□ -0.34
USE1-201ENST00000263897 H3BUI4 141 aa12.92□□□□□ -0.34
USE1-201ENST00000263897 HSPB6O14558 160 aa12.92□□□□□ -0.34
USE1-201ENST00000263897 PRRX1P54821 245 aa12.92□□□□□ -0.34
USE1-201ENST00000263897 PAX5Q02548 391 aa12.92□□□□□ -0.34
USE1-201ENST00000263897 RIPK1Q13546 671 aa12.92□□□□□ -0.34
USE1-201ENST00000263897 NHLRC3Q5JS37 347 aa12.92□□□□□ -0.34
USE1-201ENST00000263897 OSR2Q8N2R0 312 aa12.92□□□□□ -0.34
USE1-201ENST00000263897 KLHDC1Q8N7A1 406 aa12.92□□□□□ -0.34
USE1-201ENST00000263897 CFHR4Q92496 578 aa12.92□□□□□ -0.34
USE1-201ENST00000263897 PGLYRP3Q96LB9 341 aa12.92□□□□□ -0.34
USE1-201ENST00000263897 PRSS22Q9GZN4 317 aa12.92□□□□□ -0.34
USE1-201ENST00000263897 SERTAD4Q9NUC0 356 aa12.92□□□□□ -0.34
USE1-201ENST00000263897 ST3GAL6Q9Y274 331 aa12.92□□□□□ -0.34
USE1-201ENST00000263897 FAM172BPA6NC97 362 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 BUB1B-PAK6H3BSN5 160 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 TOR1AO14656 332 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 KCNAB3O43448 404 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 TSPAN15O95858 294 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 CSTBP04080 98 aaKnown RBP12.91□□□□□ -0.34
USE1-201ENST00000263897 C21orf33P30042 268 aaPredicted RBP12.91□□□□□ -0.34
USE1-201ENST00000263897 KCNJ3P48549 501 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 TAS2R43P59537 309 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 HABP2Q14520 560 aaPredicted RBP12.91□□□□□ -0.34
USE1-201ENST00000263897 C2orf68Q2NKX9 166 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 RSBN1Q5VWQ0 802 aaPredicted RBP12.91□□□□□ -0.34
USE1-201ENST00000263897 AHSA2Q719I0 299 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 STX19Q8N4C7 294 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 BPIFB6Q8NFQ5 453 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 OR13A1Q8NGR1 328 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 PLPPR1Q8TBJ4 325 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 TFAP2CQ92754 450 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 CREB3L1Q96BA8 519 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 KIRREL1Q96J84 757 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 S100A13Q99584 98 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 ZNF184Q99676 751 aaPredicted RBP12.91□□□□□ -0.34
USE1-201ENST00000263897 IFT22Q9H7X7 185 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 DCLRE1BQ9H816 532 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 LINC00574Q9H8X3 128 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 PCDHB16Q9NRJ7 776 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 PAK1IP1Q9NWT1 392 aaPredicted RBP12.91□□□□□ -0.34
USE1-201ENST00000263897 CKLFQ9UBR5 152 aa12.91□□□□□ -0.34
USE1-201ENST00000263897 TRAV8-7A0A075B6U6 113 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 TRBV5-7A0A0A0MS05 114 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 LY6LH3BQJ8 138 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 ZNF780AO75290 641 aaPredicted RBP12.9□□□□□ -0.34
USE1-201ENST00000263897 CD1AP06126 327 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 VSIG10L2P0DP72 767 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 NFYBP25208 207 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 BRS3P32247 399 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 CEACAM3P40198 252 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 GLP1RP43220 463 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 RBM11P57052 281 aaKnown RBP12.9□□□□□ -0.34
USE1-201ENST00000263897 BLCAPP62952 87 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 DEFA6Q01524 100 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 HLA-DRB5Q30154 266 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 UTF1Q5T230 341 aa12.9□□□□□ -0.34
USE1-201ENST00000263897 NANOGP1Q8N7R0 232 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms