RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 LRFN1Q9P244 771 aa12.98□□□□□ -0.33
XRCC1-201ENST00000262887 WDFY3Q8IZQ1 3526 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 COL5A1P20908 1838 aaPredicted RBP12.97□□□□□ -0.33
XRCC1-201ENST00000262887 A0A0U1RQV5 110 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 C3orf85A0A1B0GTC6 90 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 SPRY1O43609 319 aaPredicted RBP12.97□□□□□ -0.33
XRCC1-201ENST00000262887 IGHV4-34P06331 123 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 UCP3P55916 312 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 C17orf78Q8N4C9 275 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 GPR173Q9NS66 373 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 DOCK8Q8NF50 2099 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 TRAV1-1A0A0B4J248 108 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 IGHV3-20A0A0C4DH32 117 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 A0A1W2PNR3 127 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 TCRBV21S2A2A0A5A6 115 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 XKRY2A2RUG3 117 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 ZFP92A6NM28 416 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 BLKP51451 505 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 ZNF41P51814 821 aaPredicted RBP12.97□□□□□ -0.33
XRCC1-201ENST00000262887 RAC1P63000 192 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 SRPXP78539 464 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 KCNMB1Q16558 191 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 SPIN2AQ99865 258 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 SPIN2BQ9BPZ2 258 aa12.97□□□□□ -0.33
XRCC1-201ENST00000262887 CCDC163A0A0D9SF12 145 aa12.96□□□□□ -0.33
XRCC1-201ENST00000262887 JMJD7P0C870 316 aa12.96□□□□□ -0.33
XRCC1-201ENST00000262887 FASLGP48023 281 aa12.96□□□□□ -0.33
XRCC1-201ENST00000262887 TAS2R30P59541 319 aa12.96□□□□□ -0.33
XRCC1-201ENST00000262887 BAXQ07812 192 aa12.96□□□□□ -0.33
XRCC1-201ENST00000262887 RSPO4Q2I0M5 234 aaPredicted RBP12.96□□□□□ -0.33
XRCC1-201ENST00000262887 MPV17LQ2QL34 196 aa12.96□□□□□ -0.33
XRCC1-201ENST00000262887 NKAIN1Q4KMZ8 207 aa12.96□□□□□ -0.33
XRCC1-201ENST00000262887 COA6Q5JTJ3 125 aaKnown RBP12.96□□□□□ -0.33
XRCC1-201ENST00000262887 DMRTA1Q5VZB9 504 aa12.96□□□□□ -0.33
XRCC1-201ENST00000262887 SHISA6Q6ZSJ9 500 aa12.96□□□□□ -0.33
XRCC1-201ENST00000262887 SLC25A26Q70HW3 274 aa12.96□□□□□ -0.33
XRCC1-201ENST00000262887 ODF3L1Q8IXM7 274 aa12.96□□□□□ -0.33
XRCC1-201ENST00000262887 HIST1H2AAQ96QV6 131 aa12.96□□□□□ -0.33
XRCC1-201ENST00000262887 IGFLR1Q9H665 355 aa12.96□□□□□ -0.33
XRCC1-201ENST00000262887 ZNF286AQ9HBT8 521 aa12.96□□□□□ -0.33
XRCC1-201ENST00000262887 GAB2Q9UQC2 676 aa12.96□□□□□ -0.33
XRCC1-201ENST00000262887 SEC16AO15027 2179 aa12.96□□□□□ -0.33
XRCC1-201ENST00000262887 ZNF814B7Z6K7 855 aa12.96□□□□□ -0.34
XRCC1-201ENST00000262887 SLC33A1O00400 549 aaPredicted RBP12.96□□□□□ -0.34
XRCC1-201ENST00000262887 MPPED1O15442 326 aa12.96□□□□□ -0.34
XRCC1-201ENST00000262887 TK1P04183 234 aa12.96□□□□□ -0.34
XRCC1-201ENST00000262887 BCL2P10415 239 aa12.96□□□□□ -0.34
XRCC1-201ENST00000262887 AADACP22760 399 aa12.96□□□□□ -0.34
XRCC1-201ENST00000262887 CTSSP25774 331 aa12.96□□□□□ -0.34
XRCC1-201ENST00000262887 GUCA1AP43080 201 aaPredicted RBP12.96□□□□□ -0.34
XRCC1-201ENST00000262887 CXorf66Q5JRM2 361 aaPredicted RBP12.96□□□□□ -0.34
XRCC1-201ENST00000262887 C1orf189Q5VU69 101 aa12.96□□□□□ -0.34
XRCC1-201ENST00000262887 ZNF695Q8IW36 515 aa12.96□□□□□ -0.34
XRCC1-201ENST00000262887 H1FOOQ8IZA3 346 aaPredicted RBP12.96□□□□□ -0.34
XRCC1-201ENST00000262887 ADGRG7Q96K78 797 aa12.96□□□□□ -0.34
XRCC1-201ENST00000262887 KLRF1Q9NZS2 232 aa12.96□□□□□ -0.34
XRCC1-201ENST00000262887 SHISA7A6NL88 538 aa12.95□□□□□ -0.34
XRCC1-201ENST00000262887 IL22RA1Q8N6P7 574 aa12.95□□□□□ -0.34
XRCC1-201ENST00000262887 DNASE2BQ8WZ79 361 aa12.95□□□□□ -0.34
XRCC1-201ENST00000262887 ATP5SQ99766 215 aa12.95□□□□□ -0.34
XRCC1-201ENST00000262887 TMEM222Q9H0R3 208 aa12.95□□□□□ -0.34
XRCC1-201ENST00000262887 VAX2Q9UIW0 290 aa12.95□□□□□ -0.34
XRCC1-201ENST00000262887 UBE2J1Q9Y385 318 aaPredicted RBP12.95□□□□□ -0.34
XRCC1-201ENST00000262887 CELSR3Q9NYQ7 3312 aa12.95□□□□□ -0.34
XRCC1-201ENST00000262887 CTHP32929 405 aa12.95□□□□□ -0.34
XRCC1-201ENST00000262887 FOXL2P58012 376 aa12.95□□□□□ -0.34
XRCC1-201ENST00000262887 ZNF154Q13106 437 aa12.95□□□□□ -0.34
XRCC1-201ENST00000262887 TMEM240Q5SV17 173 aa12.95□□□□□ -0.34
XRCC1-201ENST00000262887 ABHD14BQ96IU4 210 aa12.95□□□□□ -0.34
XRCC1-201ENST00000262887 THADAQ6YHU6 1953 aa12.95□□□□□ -0.34
XRCC1-201ENST00000262887 GJC3Q8NFK1 279 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 THOC3Q96J01 351 aaKnown RBP12.94□□□□□ -0.34
XRCC1-201ENST00000262887 MRGPRX4Q96LA9 322 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 H3BMH7 237 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 ADAM20O43506 726 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 NXPH3O95157 252 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 TMEM50AO95807 157 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 RPLP1P05386 114 aaKnown RBP12.94□□□□□ -0.34
XRCC1-201ENST00000262887 MMP9P14780 707 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 P2RY6Q15077 328 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 RAB35Q15286 201 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 HIST3H3Q16695 136 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 ZNF787Q6DD87 383 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 ADPRHL1Q8NDY3 354 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 C10orf35Q96D05 121 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 ZNF665Q9H7R5 613 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 CBLN4Q9NTU7 201 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 P4HTMQ9NXG6 502 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 LILRA5A6NI73 299 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 PPYP01298 95 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 GABRG2P18507 467 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 MSR1P21757 451 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 ARL4DP49703 201 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 PLPPR5Q32ZL2 321 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 PIGYQ3MUY2 71 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 SLC25A24Q6NUK1 477 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 OXGR1Q96P68 337 aa12.94□□□□□ -0.34
XRCC1-201ENST00000262887 ATG2AQ2TAZ0 1938 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 GON4LQ3T8J9 2241 aa12.93□□□□□ -0.34
XRCC1-201ENST00000262887 A6NNC1 897 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms