RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 C1orf196B1AJZ1 125 aa12.1□□□□□ -0.47
CDH1-201ENST00000261769 APOBEC3AP31941 199 aaPredicted RBP12.1□□□□□ -0.47
CDH1-201ENST00000261769 HLA-DRB3P79483 266 aa12.1□□□□□ -0.47
CDH1-201ENST00000261769 TMUB2Q71RG4 321 aa12.1□□□□□ -0.47
CDH1-201ENST00000261769 TMEM147Q9BVK8 224 aa12.1□□□□□ -0.47
CDH1-201ENST00000261769 NDUFB6O95139 128 aa12.1□□□□□ -0.47
CDH1-201ENST00000261769 ZNF714Q96N38 554 aa12.1□□□□□ -0.47
CDH1-201ENST00000261769 CCL13Q99616 98 aa12.1□□□□□ -0.47
CDH1-201ENST00000261769 PRDM14Q9GZV8 571 aa12.1□□□□□ -0.47
CDH1-201ENST00000261769 RASL12Q9NYN1 266 aa12.1□□□□□ -0.47
CDH1-201ENST00000261769 AK3Q9UIJ7 227 aa12.1□□□□□ -0.47
CDH1-201ENST00000261769 CD1AP06126 327 aa12.1□□□□□ -0.47
CDH1-201ENST00000261769 SNRNP70P08621 437 aaKnown RBP12.1□□□□□ -0.47
CDH1-201ENST00000261769 GLRXP35754 106 aa12.1□□□□□ -0.47
CDH1-201ENST00000261769 YIPF5Q969M3 257 aa12.1□□□□□ -0.47
CDH1-201ENST00000261769 FLYWCH2Q96CP2 140 aaKnown RBP12.1□□□□□ -0.47
CDH1-201ENST00000261769 ADAT3Q96EY9 351 aaPredicted RBP12.1□□□□□ -0.47
CDH1-201ENST00000261769 TPPP3Q9BW30 176 aa12.1□□□□□ -0.47
CDH1-201ENST00000261769 PUS1Q9Y606 427 aaKnown RBP eCLIP12.1□□□□□ -0.47
CDH1-201ENST00000261769 C10orf128Q5T292 105 aa12.1□□□□□ -0.47
CDH1-201ENST00000261769 OR4A4PQ8NGN8 299 aa12.1□□□□□ -0.47
CDH1-201ENST00000261769 RLFQ13129 1914 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 ARID1AO14497 2285 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 TMEM8BA6NDV4 472 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 CELA3AP09093 270 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 MPPED2Q15777 294 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 NSUN5P2Q63ZY6 315 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 HSD17B10Q99714 261 aaKnown RBP12.09□□□□□ -0.47
CDH1-201ENST00000261769 TMUB1Q9BVT8 246 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 CHODLQ9H9P2 273 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 MSRB2Q9Y3D2 182 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 DHRS7CA6NNS2 312 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 SOCS1O15524 211 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 ACSF3Q4G176 576 aaPredicted RBP12.09□□□□□ -0.47
CDH1-201ENST00000261769 TMEM182Q6ZP80 229 aaPredicted RBP12.09□□□□□ -0.47
CDH1-201ENST00000261769 KLF14Q8TD94 323 aaPredicted RBP12.09□□□□□ -0.47
CDH1-201ENST00000261769 UQCC1Q9NVA1 299 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 MED9Q9NWA0 146 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 NEUROG3Q9Y4Z2 214 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 H3BP45 60 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 RPL36A-HNRNPH2H7BZ11 118 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 PYCARD-AS1I3L0S3 204 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 SLC25A6P12236 298 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 COL10A1Q03692 680 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 AVPI1Q5T686 147 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 SVBPQ8N300 66 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 KCNRGQ8N5I3 272 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 RNASE6Q93091 150 aaKnown RBP12.09□□□□□ -0.47
CDH1-201ENST00000261769 PKIBQ9C010 78 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 RCL1Q9Y2P8 373 aaKnown RBP12.09□□□□□ -0.47
CDH1-201ENST00000261769 XKRY2A2RUG3 117 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 POM121CA8CG34 1229 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 KLF7O75840 302 aaPredicted RBP12.09□□□□□ -0.47
CDH1-201ENST00000261769 FGF7P21781 194 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 GFRA1P56159 465 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 TMEM104Q8NE00 496 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 AAMDCQ9H7C9 122 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 CKAP5Q14008 2032 aa12.09□□□□□ -0.47
CDH1-201ENST00000261769 IGKV1D-42A0A075B6H8 117 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 GCM2O75603 506 aaPredicted RBP12.08□□□□□ -0.48
CDH1-201ENST00000261769 SFT2D2O95562 160 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 GYPAP02724 150 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 C1QCP02747 245 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 CTSDP07339 412 aaPredicted RBP12.08□□□□□ -0.48
CDH1-201ENST00000261769 DAOP14920 347 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 NAAAQ02083 359 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 GCSAMQ8N6F7 178 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 SNX22Q96L94 193 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 TMPRSS13Q9BYE2 586 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 SLIRPQ9GZT3 109 aaKnown RBP12.08□□□□□ -0.48
CDH1-201ENST00000261769 RAB18Q9NP72 206 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 TMEM229AB2RXF0 380 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 ZIC3O60481 467 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 FOXH1O75593 365 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 HOXD11P31277 338 aaPredicted RBP12.08□□□□□ -0.48
CDH1-201ENST00000261769 RBM11P57052 281 aaKnown RBP12.08□□□□□ -0.48
CDH1-201ENST00000261769 AESQ08117 197 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 PXT1Q8NFP0 134 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 FLVCR1-AS1Q8TAF5 88 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 C20orf24Q9BUV8 137 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 COA4Q9NYJ1 87 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 MTCH1Q9NZJ7 389 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 NPIPB9F8W1W9 429 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 SSX4O60224 188 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 PTHLHP12272 177 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 CPN1P15169 458 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 FAM27E3Q08E93 113 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 BAK1Q16611 211 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 R3HDM4Q96D70 268 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 CACNG5Q9UF02 275 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 PITPNC1Q9UKF7 332 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 A0A0A6YYJ9 748 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 TGFBR3LH3BV60 316 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 C1QBP02746 253 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 VSIG8P0DPA2 414 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 CD200P41217 278 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 ETV3LQ6ZN32 361 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 FADS6Q8N9I5 356 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 PPP1R1CQ8WVI7 109 aa12.08□□□□□ -0.48
CDH1-201ENST00000261769 PTX4Q96A99 478 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms