RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 GAPTQ8N292 157 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 OR2M3Q8NG83 312 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 NEK7Q8TDX7 302 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 HMGB3O15347 200 aaKnown RBP13.73□□□□□ -0.21
LMNB1-201ENST00000261366 IL2RGP31785 369 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 ZNF468Q5VIY5 522 aaPredicted RBP13.73□□□□□ -0.21
LMNB1-201ENST00000261366 ZNF818PQ6ZRF7 136 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 PLXDC1Q8IUK5 500 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 ODF3L1Q8IXM7 274 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 ZNF100Q8IYN0 542 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 C1orf87Q8N0U7 546 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 IL22RA1Q8N6P7 574 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 NFAM1Q8NET5 270 aaPredicted RBP13.73□□□□□ -0.21
LMNB1-201ENST00000261366 SPTSSAQ969W0 71 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 ZNF501Q96CX3 271 aaPredicted RBP13.73□□□□□ -0.21
LMNB1-201ENST00000261366 HIST1H2BLQ99880 126 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 AKIRIN1Q9H9L7 192 aaPredicted RBP13.73□□□□□ -0.21
LMNB1-201ENST00000261366 MYOTQ9UBF9 498 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 PISDQ9UG56 409 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 GAB2Q9UQC2 676 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 DHHO43323 396 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 PTBP3O95758 552 aaKnown RBP13.73□□□□□ -0.21
LMNB1-201ENST00000261366 MALLQ13021 153 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 HIST3H3Q16695 136 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 LRTM2Q8N967 370 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 CABLES2Q9BTV7 478 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 TMEM222Q9H0R3 208 aa13.73□□□□□ -0.21
LMNB1-201ENST00000261366 LYRM2Q9NU23 88 aaPredicted RBP13.73□□□□□ -0.21
LMNB1-201ENST00000261366 TNRC18O15417 2968 aaPredicted RBP13.72□□□□□ -0.21
LMNB1-201ENST00000261366 DUX1O43812 170 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 NRASP01111 189 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 IGLV3-1P01715 115 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 B4GALT1P15291 398 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 Q3ZCU0 254 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 PLCXD3Q63HM9 321 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 CYB5R2Q6BCY4 276 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 REC114Q7Z4M0 266 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 STX12Q86Y82 276 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 LILRB2Q8N423 598 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 NABP1Q96AH0 204 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 ALKBH3Q96Q83 286 aaPredicted RBP13.72□□□□□ -0.21
LMNB1-201ENST00000261366 SLC25A31Q9H0C2 315 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 ESPL1Q14674 2120 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 COL6A3P12111 3177 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 IGKV1D-13A0A0B4J2D9 117 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 SCTP09683 121 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 IGKV1-13P0DP09 117 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 SRFP11831 508 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 DTYMKP23919 212 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 APLNRP35414 380 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 SSX2Q16385 188 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 SLC25A26Q70HW3 274 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 CALHM1Q8IU99 346 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 OR51H1Q8NH63 302 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 WFIKKN1Q96NZ8 548 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 BCO1Q9HAY6 547 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 MUC3AQ02505 3323 aa13.72□□□□□ -0.21
LMNB1-201ENST00000261366 CHD3Q12873 2000 aaKnown RBP13.71□□□□□ -0.21
LMNB1-201ENST00000261366 HSPB1P04792 205 aaKnown RBP13.71□□□□□ -0.21
LMNB1-201ENST00000261366 SSTP61278 116 aa13.71□□□□□ -0.21
LMNB1-201ENST00000261366 PKIAP61925 76 aa13.71□□□□□ -0.21
LMNB1-201ENST00000261366 TLE4Q04727 773 aa13.71□□□□□ -0.21
LMNB1-201ENST00000261366 COL19A1Q14993 1142 aa13.71□□□□□ -0.21
LMNB1-201ENST00000261366 ZNF506Q5JVG8 444 aa13.71□□□□□ -0.21
LMNB1-201ENST00000261366 RNASE11Q8TAA1 199 aaKnown RBP13.71□□□□□ -0.21
LMNB1-201ENST00000261366 ANGPTL4Q9BY76 406 aa13.71□□□□□ -0.21
LMNB1-201ENST00000261366 CCL28Q9NRJ3 127 aa13.71□□□□□ -0.21
LMNB1-201ENST00000261366 KIAA2026Q5HYC2 2103 aa13.71□□□□□ -0.21
LMNB1-201ENST00000261366 LMO7DNF2Z398 122 aa13.71□□□□□ -0.22
LMNB1-201ENST00000261366 ST8SIA5O15466 376 aa13.71□□□□□ -0.22
LMNB1-201ENST00000261366 CA11O75493 328 aa13.71□□□□□ -0.22
LMNB1-201ENST00000261366 KCNMB1Q16558 191 aa13.71□□□□□ -0.22
LMNB1-201ENST00000261366 SELENOHQ8IZQ5 122 aaKnown RBP13.71□□□□□ -0.22
LMNB1-201ENST00000261366 ATG101Q9BSB4 218 aa13.71□□□□□ -0.22
LMNB1-201ENST00000261366 IL36RNQ9UBH0 155 aa13.71□□□□□ -0.22
LMNB1-201ENST00000261366 TRIOBPQ9H2D6 2365 aa13.71□□□□□ -0.22
LMNB1-201ENST00000261366 A0A087WWC5 75 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 A0A1B0GW64 132 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 CEBPZOSA8MTT3 80 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 SLC31A2O15432 143 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 IAPPP10997 89 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 TCN2P20062 427 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 CCNOP22674 350 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 ELLP55199 621 aaPredicted RBP13.7□□□□□ -0.22
LMNB1-201ENST00000261366 ADIRFQ15847 76 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 OR5T1Q8NG75 326 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 HS3ST6Q96QI5 342 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 OR6C1Q96RD1 312 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 PHF7Q9BWX1 381 aaPredicted RBP13.7□□□□□ -0.22
LMNB1-201ENST00000261366 DEFB126Q9BYW3 111 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 IGHV3-9P01782 118 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 ERVS71-1P61550 626 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 BEND4Q6ZU67 534 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 SSX7Q7RTT5 188 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 TGIF2LXQ8IUE1 241 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 GPR137CQ8N3F9 429 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 RASL10BQ96S79 203 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 RPRMQ9NS64 109 aa13.7□□□□□ -0.22
LMNB1-201ENST00000261366 IFNL4K9M1U5 179 aa13.69□□□□□ -0.22
LMNB1-201ENST00000261366 TNFSF11O14788 317 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms