RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 WNT2BQ93097 391 aa11.2□□□□□ -0.62
THSD1-201ENST00000258613 CPNE2Q96FN4 548 aaPredicted RBP11.2□□□□□ -0.62
THSD1-201ENST00000258613 HIST1H2AAQ96QV6 131 aa11.2□□□□□ -0.62
THSD1-201ENST00000258613 NMES1Q9C002 83 aa11.2□□□□□ -0.62
THSD1-201ENST00000258613 PARP12Q9H0J9 701 aaKnown RBP11.2□□□□□ -0.62
THSD1-201ENST00000258613 ZNF286AQ9HBT8 521 aa11.2□□□□□ -0.62
THSD1-201ENST00000258613 IGKV1D-13A0A0B4J2D9 117 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 CRYM-AS1A6NIL9 109 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 SS18L1O75177 396 aaPredicted RBP11.19□□□□□ -0.62
THSD1-201ENST00000258613 IGKV1-13P0DP09 117 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 ZNF585AQ6P3V2 769 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 DHRS11Q6UWP2 260 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 RPRMLQ8N4K4 120 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 C2orf50Q96LR7 162 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 SCGB3A2Q96PL1 93 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 TP53RKQ96S44 253 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 TPRP12270 2363 aaKnown RBP11.19□□□□□ -0.62
THSD1-201ENST00000258613 IGKV1-6A0A0C4DH72 117 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 GATCO43716 136 aaKnown RBP11.19□□□□□ -0.62
THSD1-201ENST00000258613 CTSDP07339 412 aaPredicted RBP11.19□□□□□ -0.62
THSD1-201ENST00000258613 SFTPCP11686 197 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 ARL6IP1Q15041 203 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 SPIN3Q5JUX0 258 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 CYTL1Q9NRR1 136 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 RASL12Q9NYN1 266 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 FAM74A7A6NL05 159 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 ANKRD30BLA7E2S9 258 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 PHF1O43189 567 aaPredicted RBP11.19□□□□□ -0.62
THSD1-201ENST00000258613 DTYMKP23919 212 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 FAM74A3Q4VXF1 159 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 FAM53AQ6NSI3 398 aaPredicted RBP11.19□□□□□ -0.62
THSD1-201ENST00000258613 ZNF826PQ6ZT77 177 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 MKXQ8IYA7 352 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 OR52M1Q8NGK5 317 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 GLYATL2Q8WU03 294 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 PIK3IP1Q96FE7 263 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 IL36GQ9NZH8 169 aa11.19□□□□□ -0.62
THSD1-201ENST00000258613 CDIPTO14735 213 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 RRP8O43159 456 aaKnown RBP11.18□□□□□ -0.62
THSD1-201ENST00000258613 CA11O75493 328 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 GRPP07492 148 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 MPV17P39210 176 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 FGF12P61328 243 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 IL15RAQ13261 267 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 ZNF345Q14585 488 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 LDLRAD3Q86YD5 345 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 SUMF2Q8NBJ7 301 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 SLC25A40Q8TBP6 338 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 IL1F10Q8WWZ1 152 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 DNASE2O00115 360 aaPredicted RBP11.18□□□□□ -0.62
THSD1-201ENST00000258613 SIRPB1O00241 398 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 LRP3O75074 770 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 CST4P01036 141 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 PPYP01298 95 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 ZNF44P15621 663 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 ZNF14P17017 642 aaPredicted RBP11.18□□□□□ -0.62
THSD1-201ENST00000258613 PTAFRP25105 342 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 UBA52P62987 128 aaKnown RBP11.18□□□□□ -0.62
THSD1-201ENST00000258613 SNTB1Q13884 538 aaKnown RBP11.18□□□□□ -0.62
THSD1-201ENST00000258613 OR1S2Q8NGQ3 325 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 CLCF1Q9UBD9 225 aa11.18□□□□□ -0.62
THSD1-201ENST00000258613 TRAV24A0A0B4J272 114 aa11.17□□□□□ -0.62
THSD1-201ENST00000258613 HSD17B6O14756 317 aa11.17□□□□□ -0.62
THSD1-201ENST00000258613 KIR2DL2P43627 348 aaPredicted RBP11.17□□□□□ -0.62
THSD1-201ENST00000258613 UBE2NP61088 152 aaKnown RBP11.17□□□□□ -0.62
THSD1-201ENST00000258613 PPA1Q15181 289 aa11.17□□□□□ -0.62
THSD1-201ENST00000258613 RPL7L1Q6DKI1 246 aaKnown RBP11.17□□□□□ -0.62
THSD1-201ENST00000258613 MRPS24Q96EL2 167 aaKnown RBP11.17□□□□□ -0.62
THSD1-201ENST00000258613 GMPPAQ96IJ6 420 aaPredicted RBP11.17□□□□□ -0.62
THSD1-201ENST00000258613 OPN3Q9H1Y3 402 aaPredicted RBP11.17□□□□□ -0.62
THSD1-201ENST00000258613 GP6Q9HCN6 339 aa11.17□□□□□ -0.62
THSD1-201ENST00000258613 ASF1BQ9NVP2 202 aa11.17□□□□□ -0.62
THSD1-201ENST00000258613 C1orf123Q9NWV4 160 aa11.17□□□□□ -0.62
THSD1-201ENST00000258613 SMPD2O60906 423 aa11.17□□□□□ -0.62
THSD1-201ENST00000258613 FBXO24O75426 580 aa11.17□□□□□ -0.62
THSD1-201ENST00000258613 COX5BP10606 129 aa11.17□□□□□ -0.62
THSD1-201ENST00000258613 GNRHRP30968 328 aa11.17□□□□□ -0.62
THSD1-201ENST00000258613 PPP1CBP62140 327 aa11.17□□□□□ -0.62
THSD1-201ENST00000258613 TMEM187Q14656 261 aa11.17□□□□□ -0.62
THSD1-201ENST00000258613 PRSS54Q6PEW0 395 aa11.17□□□□□ -0.62
THSD1-201ENST00000258613 FAM214BQ7L5A3 538 aa11.17□□□□□ -0.62
THSD1-201ENST00000258613 DMRTC2Q8IXT2 367 aaPredicted RBP11.17□□□□□ -0.62
THSD1-201ENST00000258613 ASB13Q8WXK3 278 aa11.17□□□□□ -0.62
THSD1-201ENST00000258613 NAA60Q9H7X0 242 aa11.17□□□□□ -0.62
THSD1-201ENST00000258613 BARX1Q9HBU1 254 aaPredicted RBP11.17□□□□□ -0.62
THSD1-201ENST00000258613 PTPRQQ9UMZ3 2332 aa11.17□□□□□ -0.62
THSD1-201ENST00000258613 MED19A0JLT2 244 aaPredicted RBP11.16□□□□□ -0.62
THSD1-201ENST00000258613 ID4P47928 161 aa11.16□□□□□ -0.62
THSD1-201ENST00000258613 HERV-K104P61576 105 aa11.16□□□□□ -0.62
THSD1-201ENST00000258613 SRSF3P84103 164 aaKnown RBP11.16□□□□□ -0.62
THSD1-201ENST00000258613 CYCSP99999 105 aaKnown RBP11.16□□□□□ -0.62
THSD1-201ENST00000258613 SURF2Q15527 256 aaPredicted RBP11.16□□□□□ -0.62
THSD1-201ENST00000258613 RTL6Q6ICC9 239 aa11.16□□□□□ -0.62
THSD1-201ENST00000258613 PRSS33Q8NF86 280 aa11.16□□□□□ -0.62
THSD1-201ENST00000258613 OR5A2Q8NGI9 324 aa11.16□□□□□ -0.62
THSD1-201ENST00000258613 OR1J1Q8NGS3 322 aa11.16□□□□□ -0.62
THSD1-201ENST00000258613 EDARADDQ8WWZ3 215 aa11.16□□□□□ -0.62
THSD1-201ENST00000258613 NARS2Q96I59 477 aaKnown RBP11.16□□□□□ -0.62
THSD1-201ENST00000258613 CCL28Q9NRJ3 127 aa11.16□□□□□ -0.62
THSD1-201ENST00000258613 DECR2Q9NUI1 292 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms