RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 MEGF11A6BM72 1044 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 HSPB6O14558 160 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 GEMIN2O14893 280 aaKnown RBP6.95□□□□□ -1.3
TMEM258-201ENST00000257262 CSN2P05814 226 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 MELTFP08582 738 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 UCHL1P09936 223 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 ZNF728P0DKX0 622 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 GTF2F2P13984 249 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 SAA4P35542 130 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 RBM11P57052 281 aaKnown RBP6.95□□□□□ -1.3
TMEM258-201ENST00000257262 FABP5Q01469 135 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 GPR176Q14439 515 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 ATXN7L3Q14CW9 347 aaPredicted RBP6.95□□□□□ -1.3
TMEM258-201ENST00000257262 SSX1Q16384 188 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 SLC22A6Q4U2R8 563 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 HSD17B12Q53GQ0 312 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 NHLRC3Q5JS37 347 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 KRBOX4Q5JUW0 171 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 NCR3LG1Q68D85 454 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 AWAT2Q6E213 333 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 ZNF367Q7RTV3 350 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 TRAPPC6BQ86SZ2 158 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 NKAIN3Q8N8D7 197 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 SPATA3Q8NHX4 192 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 PLPPR1Q8TBJ4 325 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 PHYHIPQ92561 330 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 CORO2AQ92828 525 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 COQ2Q96H96 371 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 BARHL1Q9BZE3 327 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 HEXA-AS1Q9H8Q6 139 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 PCDHB16Q9NRJ7 776 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 TNFRSF19Q9NS68 423 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 UBE2J1Q9Y385 318 aaPredicted RBP6.95□□□□□ -1.3
TMEM258-201ENST00000257262 FAM96BQ9Y3D0 163 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 LINC00312Q9Y6C7 94 aa6.95□□□□□ -1.3
TMEM258-201ENST00000257262 TRGV10A0A0A0MS01 117 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 FUOMA2VDF0 154 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 MMP23AO75900 390 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 ARL6IP5O75915 188 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 OR7C1O76099 320 aaPredicted RBP6.94□□□□□ -1.3
TMEM258-201ENST00000257262 RBP4P02753 201 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 IGHV1-8P0DP01 117 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 COX7A1P24310 79 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 PSMA1P25786 263 aaKnown RBP6.94□□□□□ -1.3
TMEM258-201ENST00000257262 GABRA5P31644 462 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 IER3P46695 156 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 TAF9Q16594 264 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 MPV17LQ2QL34 196 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 MIDNQ504T8 468 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 PAN3Q58A45 887 aaKnown RBP6.94□□□□□ -1.3
TMEM258-201ENST00000257262 C1orf100Q5SVJ3 147 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 ATAD3CQ5T2N8 411 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 UBE2UQ5VVX9 321 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 GLT8D1Q68CQ7 371 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 LINC00596Q86U02 117 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 SUMF2Q8NBJ7 301 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 TMEM104Q8NE00 496 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 C17orf50Q8WW18 174 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 SLC25A28Q96A46 364 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 FOXRED1Q96CU9 486 aaPredicted RBP6.94□□□□□ -1.3
TMEM258-201ENST00000257262 GFI1Q99684 422 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 UQCC2Q9BRT2 126 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 DPCDQ9BVM2 203 aaPredicted RBP6.94□□□□□ -1.3
TMEM258-201ENST00000257262 SLITRK2Q9H156 845 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 BANF2Q9H503 90 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 IFT22Q9H7X7 185 aa6.94□□□□□ -1.3
TMEM258-201ENST00000257262 MEIKINA0A087WXM9 373 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 ODAMA1E959 279 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 TMEM89A2RUT3 159 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 CLDN34H7C241 214 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 CRTAPO75718 401 aaPredicted RBP6.93□□□□□ -1.3
TMEM258-201ENST00000257262 IGHV4-59P01825 116 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 RNASE1P07998 156 aaKnown RBP6.93□□□□□ -1.3
TMEM258-201ENST00000257262 FBP1P09467 338 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 CGB3P0DN86 165 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 CGB7P0DN87 165 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 CD37P11049 281 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 MGMTP16455 207 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 OMGP23515 440 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 CALRP27797 417 aaKnown RBP6.93□□□□□ -1.3
TMEM258-201ENST00000257262 ACTG1P63261 375 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 RSBN1Q5VWQ0 802 aaPredicted RBP6.93□□□□□ -1.3
TMEM258-201ENST00000257262 C16orf87Q6PH81 154 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 BAIAP2L2Q6UXY1 529 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 LHFPL4Q7Z7J7 247 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 LDLRAD3Q86YD5 345 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 ZNF565Q8N9K5 539 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 OR11H6Q8NGC7 330 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 OR13D1Q8NGV5 346 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 TAF15Q92804 592 aaKnown RBP eCLIP6.93□□□□□ -1.3
TMEM258-201ENST00000257262 FAM46BQ96A09 425 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 MRPS24Q96EL2 167 aaKnown RBP6.93□□□□□ -1.3
TMEM258-201ENST00000257262 AJUBAQ96IF1 538 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 CHIAQ9BZP6 476 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 SELENOIQ9C0D9 397 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 GAL3ST2Q9H3Q3 398 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 ZMAT3Q9HA38 289 aaKnown RBP6.93□□□□□ -1.3
TMEM258-201ENST00000257262 NDUFB11Q9NX14 153 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 TAS2R3Q9NYW6 316 aa6.93□□□□□ -1.3
TMEM258-201ENST00000257262 ZNRD1Q9P1U0 126 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms