RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 LYZL2Q7Z4W2 148 aa13.52□□□□□ -0.24
LRFN1-201ENST00000248668 ZFP62Q8NB50 900 aaPredicted RBP13.52□□□□□ -0.24
LRFN1-201ENST00000248668 WDYHV1Q96HA8 205 aa13.52□□□□□ -0.24
LRFN1-201ENST00000248668 RSRP1Q9BUV0 290 aa13.52□□□□□ -0.24
LRFN1-201ENST00000248668 BARX1Q9HBU1 254 aaPredicted RBP13.52□□□□□ -0.24
LRFN1-201ENST00000248668 TMEM218A2RU14 115 aa13.52□□□□□ -0.25
LRFN1-201ENST00000248668 CRYM-AS1A6NIL9 109 aa13.52□□□□□ -0.25
LRFN1-201ENST00000248668 HS3ST1O14792 307 aa13.52□□□□□ -0.25
LRFN1-201ENST00000248668 CA11O75493 328 aa13.52□□□□□ -0.25
LRFN1-201ENST00000248668 RCC1P18754 421 aaPredicted RBP13.52□□□□□ -0.25
LRFN1-201ENST00000248668 CA6P23280 308 aa13.52□□□□□ -0.25
LRFN1-201ENST00000248668 SOX8P57073 446 aa13.52□□□□□ -0.25
LRFN1-201ENST00000248668 RNPS1Q15287 305 aaKnown RBP13.52□□□□□ -0.25
LRFN1-201ENST00000248668 PARD6AQ9NPB6 346 aa13.52□□□□□ -0.25
LRFN1-201ENST00000248668 RPL36A-HNRNPH2H7BZ11 118 aa13.52□□□□□ -0.25
LRFN1-201ENST00000248668 RRP8O43159 456 aaKnown RBP13.52□□□□□ -0.25
LRFN1-201ENST00000248668 DTYMKP23919 212 aa13.52□□□□□ -0.25
LRFN1-201ENST00000248668 PPT1P50897 306 aa13.52□□□□□ -0.25
LRFN1-201ENST00000248668 SURF2Q15527 256 aaPredicted RBP13.52□□□□□ -0.25
LRFN1-201ENST00000248668 P4HA3Q7Z4N8 544 aa13.52□□□□□ -0.25
LRFN1-201ENST00000248668 RDH5Q92781 318 aa13.52□□□□□ -0.25
LRFN1-201ENST00000248668 HIST1H2AAQ96QV6 131 aa13.52□□□□□ -0.25
LRFN1-201ENST00000248668 SLC2A9Q9NRM0 540 aa13.52□□□□□ -0.25
LRFN1-201ENST00000248668 ARHGAP21Q5T5U3 1957 aa13.52□□□□□ -0.25
LRFN1-201ENST00000248668 ROS1P08922 2347 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 A0A1B0GW55 424 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 ZNF724A8MTY0 619 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 ZNF705EA8MWA4 302 aaPredicted RBP13.51□□□□□ -0.25
LRFN1-201ENST00000248668 LYZL6O75951 148 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 IFNA4P05014 189 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 DUX4L2P0CJ85 424 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 DUX4L3P0CJ86 424 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 DUX4L4P0CJ87 422 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 DUX4L5P0CJ88 424 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 DUX4L6P0CJ89 424 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 DUX4L7P0CJ90 424 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 WT1P19544 449 aaPredicted RBP13.51□□□□□ -0.25
LRFN1-201ENST00000248668 S100PP25815 95 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 NSUN5P2Q63ZY6 315 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 DUX4Q9UBX2 424 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 CACNA1DQ01668 2161 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 ERVS71-1P61550 626 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 HERV-K104P61576 105 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 GTF3C1Q12789 2109 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 USF2Q15853 346 aaPredicted RBP13.51□□□□□ -0.25
LRFN1-201ENST00000248668 SSX2Q16385 188 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 SPIN3Q5JUX0 258 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 FDCSPQ8NFU4 85 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 SECTM1Q8WVN6 248 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 S100PBPQ96BU1 408 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 CYTL1Q9NRR1 136 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 ICE1Q9Y2F5 2266 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 TRAV39A0A0B4J263 110 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 TRAPPC2LH3BP13 241 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 SLC33A1O00400 549 aaPredicted RBP13.51□□□□□ -0.25
LRFN1-201ENST00000248668 PHF1O43189 567 aaPredicted RBP13.51□□□□□ -0.25
LRFN1-201ENST00000248668 SCTP09683 121 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 TPT1P13693 172 aaKnown RBP13.51□□□□□ -0.25
LRFN1-201ENST00000248668 SELEP16581 610 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 GLP1RP43220 463 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 IDH3GP51553 393 aaPredicted RBP13.51□□□□□ -0.25
LRFN1-201ENST00000248668 BAP18Q8IXM2 172 aa13.51□□□□□ -0.25
LRFN1-201ENST00000248668 KMT2EQ8IZD2 1858 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 GATCO43716 136 aaKnown RBP13.5□□□□□ -0.25
LRFN1-201ENST00000248668 SNAPINO95295 136 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 IFNA21P01568 189 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 FTH1P19P0C7X4 201 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 ARR3P36575 388 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 CEACAM21Q3KPI0 293 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 NRN1LQ496H8 165 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 OR2B11Q5JQS5 317 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 RPL7L1Q6DKI1 246 aaKnown RBP13.5□□□□□ -0.25
LRFN1-201ENST00000248668 UBALD1Q8TB05 177 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 IP6K3Q96PC2 410 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 NAA60Q9H7X0 242 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 TREM1Q9NP99 234 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 CEP295Q9C0D2 2601 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 TNRC6AQ8NDV7 1962 aaKnown RBP13.5□□□□□ -0.25
LRFN1-201ENST00000248668 A0A1W2PPE3 182 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 WRBO00258 174 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 LRP3O75074 770 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 FBXO24O75426 580 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 RHBDL1O75783 438 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 DHRS11Q6UWP2 260 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 CNEP1R1Q8N9A8 125 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 SLC30A7Q8NEW0 376 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 UNKLQ9H9P5 680 aaKnown RBP13.5□□□□□ -0.25
LRFN1-201ENST00000248668 UFSP2Q9NUQ7 469 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 IL36GQ9NZH8 169 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 KCNIP3Q9Y2W7 256 aa13.5□□□□□ -0.25
LRFN1-201ENST00000248668 TRBV6-7A0A0A0MS04 114 aa13.49□□□□□ -0.25
LRFN1-201ENST00000248668 FABP9Q0Z7S8 132 aa13.49□□□□□ -0.25
LRFN1-201ENST00000248668 FBXW9Q5XUX1 488 aa13.49□□□□□ -0.25
LRFN1-201ENST00000248668 ETV3LQ6ZN32 361 aa13.49□□□□□ -0.25
LRFN1-201ENST00000248668 OR1K1Q8NGR3 316 aa13.49□□□□□ -0.25
LRFN1-201ENST00000248668 PARP12Q9H0J9 701 aaKnown RBP13.49□□□□□ -0.25
LRFN1-201ENST00000248668 CADP27708 2225 aa13.49□□□□□ -0.25
LRFN1-201ENST00000248668 DIDO1Q9BTC0 2240 aaKnown RBP13.49□□□□□ -0.25
LRFN1-201ENST00000248668 DCHS1Q96JQ0 3298 aa13.49□□□□□ -0.25
LRFN1-201ENST00000248668 ACTL6AO96019 429 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms