RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 DDA1Q9BW61 102 aa18.59■□□□□ 0.57
SH2D3A-201ENST00000245908 CRIM1Q9NZV1 1036 aa18.59■□□□□ 0.57
SH2D3A-201ENST00000245908 TNRC6AQ8NDV7 1962 aaKnown RBP18.59■□□□□ 0.57
SH2D3A-201ENST00000245908 A0A096LPE4 126 aa18.58■□□□□ 0.57
SH2D3A-201ENST00000245908 A0A1W2PPZ6 126 aa18.58■□□□□ 0.57
SH2D3A-201ENST00000245908 CELA3AP09093 270 aa18.58■□□□□ 0.57
SH2D3A-201ENST00000245908 C9orf135Q5VTT2 229 aa18.58■□□□□ 0.57
SH2D3A-201ENST00000245908 DPPA2Q7Z7J5 298 aa18.58■□□□□ 0.57
SH2D3A-201ENST00000245908 TUSC5Q8IXB3 177 aa18.58■□□□□ 0.57
SH2D3A-201ENST00000245908 COMMD1Q8N668 190 aa18.58■□□□□ 0.57
SH2D3A-201ENST00000245908 Q9N2K0 584 aa18.58■□□□□ 0.57
SH2D3A-201ENST00000245908 B4GALT7Q9UBV7 327 aa18.58■□□□□ 0.57
SH2D3A-201ENST00000245908 CDS2O95674 445 aa18.58■□□□□ 0.56
SH2D3A-201ENST00000245908 NAPSAO96009 420 aa18.58■□□□□ 0.56
SH2D3A-201ENST00000245908 HLA-HP01893 362 aa18.58■□□□□ 0.56
SH2D3A-201ENST00000245908 GNRHRP30968 328 aa18.58■□□□□ 0.56
SH2D3A-201ENST00000245908 SSTP61278 116 aa18.58■□□□□ 0.56
SH2D3A-201ENST00000245908 CEACAM21Q3KPI0 293 aa18.58■□□□□ 0.56
SH2D3A-201ENST00000245908 TMEM222Q9H0R3 208 aa18.58■□□□□ 0.56
SH2D3A-201ENST00000245908 C5orf49A4QMS7 147 aa18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 TRDCB7Z8K6 153 aa18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 SS18L1O75177 396 aaPredicted RBP18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 NDUFS6O75380 124 aaKnown RBP18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 IGHV2-5P01817 119 aa18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 CCNOP22674 350 aa18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 UCP2P55851 309 aa18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 RND3P61587 244 aa18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 ZXDAP98168 799 aa18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 MEX3BQ6ZN04 569 aaKnown RBP18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 MRPL21Q7Z2W9 205 aaKnown RBP18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 ZDHHC23Q8IYP9 409 aa18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 CLCC1Q96S66 551 aa18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 C11orf1Q9H5F2 150 aa18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 SYNGR4O95473 234 aa18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 TSPAN15O95858 294 aa18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 SNCAP37840 140 aa18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 GPM6AP51674 278 aa18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 TCTEX1D2Q8WW35 142 aa18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 APOBEC3DQ96AK3 386 aaPredicted RBP18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 PARP12Q9H0J9 701 aaKnown RBP18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 CALHM2Q9HA72 323 aa18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 LUZP4Q9P127 313 aa18.57■□□□□ 0.56
SH2D3A-201ENST00000245908 C9orf172C9J069 976 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 CCL2P13500 99 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 NOVA1P51513 510 aaKnown RBP18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 FOXG1P55316 489 aaPredicted RBP18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 LPAL2Q16609 132 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 MIDNQ504T8 468 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 ABHD17BQ5VST6 288 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 TMEM56Q96MV1 263 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 HES7Q9BYE0 225 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 PRRG4Q9BZD6 226 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 TMEM56-RWDD3S4R434 201 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 TRBV23-1A0A0A0MS06 115 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 ZNF503-AS2A6NEH8 195 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 ZNF729A6NN14 1252 aaPredicted RBP18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 JMJD7P0C870 316 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 ZNF883P0CG24 379 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 NHLH2Q02577 135 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 GNMTQ14749 295 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 MPV17LQ2QL34 196 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 TCEAL6Q6IPX3 200 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 HS3ST6Q96QI5 342 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 KPTNQ9Y664 436 aa18.56■□□□□ 0.56
SH2D3A-201ENST00000245908 FREM1Q5H8C1 2179 aa18.55■□□□□ 0.56
SH2D3A-201ENST00000245908 DMDP11532 3685 aa18.55■□□□□ 0.56
SH2D3A-201ENST00000245908 A0A1W2PPE3 182 aa18.55■□□□□ 0.56
SH2D3A-201ENST00000245908 NKX2-6A6NCS4 301 aa18.55■□□□□ 0.56
SH2D3A-201ENST00000245908 TK1P04183 234 aa18.55■□□□□ 0.56
SH2D3A-201ENST00000245908 EIF2S3P41091 472 aaKnown RBP18.55■□□□□ 0.56
SH2D3A-201ENST00000245908 RAB5CP51148 216 aa18.55■□□□□ 0.56
SH2D3A-201ENST00000245908 TBC1D26Q86UD7 250 aa18.55■□□□□ 0.56
SH2D3A-201ENST00000245908 KDF1Q8NAX2 398 aaPredicted RBP18.55■□□□□ 0.56
SH2D3A-201ENST00000245908 BOD1Q96IK1 185 aa18.55■□□□□ 0.56
SH2D3A-201ENST00000245908 GUCD1Q96NT3 240 aa18.55■□□□□ 0.56
SH2D3A-201ENST00000245908 TUBA4BQ9H853 241 aa18.55■□□□□ 0.56
SH2D3A-201ENST00000245908 MTCH1Q9NZJ7 389 aa18.55■□□□□ 0.56
SH2D3A-201ENST00000245908 CACFD1Q9UGQ2 172 aa18.55■□□□□ 0.56
SH2D3A-201ENST00000245908 STRAPQ9Y3F4 350 aaKnown RBP18.55■□□□□ 0.56
SH2D3A-201ENST00000245908 DMRT1Q9Y5R6 373 aa18.55■□□□□ 0.56
SH2D3A-201ENST00000245908 ZNHIT1O43257 154 aa18.54■□□□□ 0.56
SH2D3A-201ENST00000245908 NME2P1O60361 137 aa18.54■□□□□ 0.56
SH2D3A-201ENST00000245908 CLN5O75503 358 aa18.54■□□□□ 0.56
SH2D3A-201ENST00000245908 HMGN3Q15651 99 aa18.54■□□□□ 0.56
SH2D3A-201ENST00000245908 CDCP2Q5VXM1 449 aa18.54■□□□□ 0.56
SH2D3A-201ENST00000245908 SECTM1Q8WVN6 248 aa18.54■□□□□ 0.56
SH2D3A-201ENST00000245908 SCRT1Q9BWW7 348 aa18.54■□□□□ 0.56
SH2D3A-201ENST00000245908 TTTY12Q9BZ98 90 aa18.54■□□□□ 0.56
SH2D3A-201ENST00000245908 ZNF724A8MTY0 619 aa18.54■□□□□ 0.56
SH2D3A-201ENST00000245908 ZNF732B4DXR9 585 aa18.54■□□□□ 0.56
SH2D3A-201ENST00000245908 SCTP09683 121 aa18.54■□□□□ 0.56
SH2D3A-201ENST00000245908 ZNF14P17017 642 aaPredicted RBP18.54■□□□□ 0.56
SH2D3A-201ENST00000245908 CAMLGP49069 296 aa18.54■□□□□ 0.56
SH2D3A-201ENST00000245908 EWSR1Q01844 656 aaKnown RBP eCLIP18.54■□□□□ 0.56
SH2D3A-201ENST00000245908 MKXQ8IYA7 352 aa18.54■□□□□ 0.56
SH2D3A-201ENST00000245908 AKR1E2Q96JD6 320 aa18.54■□□□□ 0.56
SH2D3A-201ENST00000245908 UBE2J1Q9Y385 318 aaPredicted RBP18.54■□□□□ 0.56
SH2D3A-201ENST00000245908 FAM166BA8MTA8 275 aa18.53■□□□□ 0.56
SH2D3A-201ENST00000245908 TUSC2O75896 110 aa18.53■□□□□ 0.56
SH2D3A-201ENST00000245908 LMO1P25800 156 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms