RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 IFT22Q9H7X7 185 aa13.6□□□□□ -0.23
LIM2-201ENST00000221973 CLN8Q9UBY8 286 aa13.6□□□□□ -0.23
LIM2-201ENST00000221973 PEX16Q9Y5Y5 336 aa13.6□□□□□ -0.23
LIM2-201ENST00000221973 FAM157AC9JC47 383 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 PDCD6O75340 191 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 TK1P04183 234 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 FUT3P21217 361 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 CHATP28329 748 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 OR3A1P47881 315 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 EDDM3AQ14507 147 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 GRK1Q15835 563 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 FAM189A2Q15884 450 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 UBE2NLQ5JXB2 153 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 WDR25Q64LD2 544 aaPredicted RBP13.59□□□□□ -0.23
LIM2-201ENST00000221973 RTN4RL2Q86UN3 420 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 CMTM4Q8IZR5 234 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 OR56B1Q8NGI3 324 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 PPP1R35Q8TAP8 253 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 NEK7Q8TDX7 302 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 H1FXQ92522 213 aaKnown RBP13.59□□□□□ -0.23
LIM2-201ENST00000221973 DPCDQ9BVM2 203 aaPredicted RBP13.59□□□□□ -0.23
LIM2-201ENST00000221973 SSBP3Q9BWW4 388 aaPredicted RBP13.59□□□□□ -0.23
LIM2-201ENST00000221973 C6orf62Q9GZU0 229 aaPredicted RBP13.59□□□□□ -0.23
LIM2-201ENST00000221973 FAM234AQ9H0X4 552 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 SPACA1Q9HBV2 294 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 ING3Q9NXR8 418 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 RCC2Q9P258 522 aaKnown RBP13.59□□□□□ -0.23
LIM2-201ENST00000221973 KCNS2Q9ULS6 477 aa13.59□□□□□ -0.23
LIM2-201ENST00000221973 MCRIP1C9JLW8 97 aa13.58□□□□□ -0.24
LIM2-201ENST00000221973 H3BUI4 141 aa13.58□□□□□ -0.24
LIM2-201ENST00000221973 CTDSP2O14595 271 aa13.58□□□□□ -0.24
LIM2-201ENST00000221973 RGS5O15539 181 aa13.58□□□□□ -0.24
LIM2-201ENST00000221973 EIF4EP06730 217 aaKnown RBP13.58□□□□□ -0.24
LIM2-201ENST00000221973 SRD5A1P18405 259 aa13.58□□□□□ -0.24
LIM2-201ENST00000221973 NPY4RP50391 375 aa13.58□□□□□ -0.24
LIM2-201ENST00000221973 TMEM50BP56557 158 aa13.58□□□□□ -0.24
LIM2-201ENST00000221973 LCN2P80188 198 aa13.58□□□□□ -0.24
LIM2-201ENST00000221973 ATXN7L3Q14CW9 347 aaPredicted RBP13.58□□□□□ -0.24
LIM2-201ENST00000221973 C6orf201Q7Z4U5 140 aa13.58□□□□□ -0.24
LIM2-201ENST00000221973 OR8H2Q8N162 312 aa13.58□□□□□ -0.24
LIM2-201ENST00000221973 DTX3Q8N9I9 347 aa13.58□□□□□ -0.24
LIM2-201ENST00000221973 OR5D13Q8NGL4 314 aa13.58□□□□□ -0.24
LIM2-201ENST00000221973 OR10R2Q8NGX6 335 aa13.58□□□□□ -0.24
LIM2-201ENST00000221973 PHF21AQ96BD5 680 aa13.58□□□□□ -0.24
LIM2-201ENST00000221973 ARHGAP5-AS1Q96IT6 56 aa13.58□□□□□ -0.24
LIM2-201ENST00000221973 LPAR2Q9HBW0 351 aa13.58□□□□□ -0.24
LIM2-201ENST00000221973 PLEKHJ1Q9NW61 149 aa13.58□□□□□ -0.24
LIM2-201ENST00000221973 A0A075B6Q4 140 aa13.57□□□□□ -0.24
LIM2-201ENST00000221973 UBE2QL1A1L167 161 aa13.57□□□□□ -0.24
LIM2-201ENST00000221973 FOXI3A8MTJ6 420 aaPredicted RBP13.57□□□□□ -0.24
LIM2-201ENST00000221973 FAM25AB3EWG3 89 aa13.57□□□□□ -0.24
LIM2-201ENST00000221973 FAM25CB3EWG5 89 aa13.57□□□□□ -0.24
LIM2-201ENST00000221973 FAM25GB3EWG6 89 aa13.57□□□□□ -0.24
LIM2-201ENST00000221973 RAB27BO00194 218 aa13.57□□□□□ -0.24
LIM2-201ENST00000221973 MGST3O14880 152 aa13.57□□□□□ -0.24
LIM2-201ENST00000221973 ZFP36P26651 326 aaKnown RBP13.57□□□□□ -0.24
LIM2-201ENST00000221973 CNPY1Q3B7I2 92 aa13.57□□□□□ -0.24
LIM2-201ENST00000221973 Q6ZTK2 550 aa13.57□□□□□ -0.24
LIM2-201ENST00000221973 GDPD3Q7L5L3 318 aa13.57□□□□□ -0.24
LIM2-201ENST00000221973 OR4M1Q8NGD0 313 aa13.57□□□□□ -0.24
LIM2-201ENST00000221973 RAB40AQ8WXH6 277 aa13.57□□□□□ -0.24
LIM2-201ENST00000221973 RAB3CQ96E17 227 aa13.57□□□□□ -0.24
LIM2-201ENST00000221973 S100A16Q96FQ6 103 aaKnown RBP13.57□□□□□ -0.24
LIM2-201ENST00000221973 SULT4A1Q9BR01 284 aa13.57□□□□□ -0.24
LIM2-201ENST00000221973 FAAP24Q9BTP7 215 aa13.57□□□□□ -0.24
LIM2-201ENST00000221973 NXF2Q9GZY0 626 aaKnown RBP13.57□□□□□ -0.24
LIM2-201ENST00000221973 ABCG5Q9H222 651 aa13.57□□□□□ -0.24
LIM2-201ENST00000221973 FOXH1O75593 365 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 SCGNO76038 276 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 TGFAP01135 160 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 APOA1P02647 267 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 GNB3P16520 340 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 ELK1P19419 428 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 EDDM3BP56851 147 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 AESQ08117 197 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 RBM39Q14498 530 aaKnown RBP13.56□□□□□ -0.24
LIM2-201ENST00000221973 PLAC9Q5JTB6 97 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 BTN2A1Q7KYR7 527 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 LAX1Q8IWV1 398 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 IZUMO1Q8IYV9 350 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 TPRX1Q8N7U7 411 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 PLPPR1Q8TBJ4 325 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 DYRK2Q92630 601 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 CMTM3Q96MX0 182 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 PECRQ9BY49 303 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 MIXL1Q9H2W2 232 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 ZMAT3Q9HA38 289 aaKnown RBP13.56□□□□□ -0.24
LIM2-201ENST00000221973 DIABLOQ9NR28 239 aa13.56□□□□□ -0.24
LIM2-201ENST00000221973 LOC105371242A0A075B767 164 aa13.55□□□□□ -0.24
LIM2-201ENST00000221973 GLAP06280 429 aa13.55□□□□□ -0.24
LIM2-201ENST00000221973 CDK2P24941 298 aa13.55□□□□□ -0.24
LIM2-201ENST00000221973 KCNJ3P48549 501 aa13.55□□□□□ -0.24
LIM2-201ENST00000221973 MADCAM1Q13477 382 aa13.55□□□□□ -0.24
LIM2-201ENST00000221973 CR1LQ2VPA4 569 aa13.55□□□□□ -0.24
LIM2-201ENST00000221973 KRBOX4Q5JUW0 171 aa13.55□□□□□ -0.24
LIM2-201ENST00000221973 OLFML2AQ68BL7 652 aa13.55□□□□□ -0.24
LIM2-201ENST00000221973 COQ2Q96H96 371 aa13.55□□□□□ -0.24
LIM2-201ENST00000221973 C1orf159Q96HA4 380 aa13.55□□□□□ -0.24
LIM2-201ENST00000221973 C19orf24Q9BVV8 132 aa13.55□□□□□ -0.24
LIM2-201ENST00000221973 MMP27Q9H306 513 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms