RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Tex13aA2AFS9 377 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Vmn1r173E9Q8V7 313 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Bet1O35623 118 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Pfdn2O70591 154 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 MscO88940 201 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 AregP31955 248 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Hist1h3bP84228 136 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Polr1dP97304 133 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Bud31Q6PGH1 103 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Actrt3Q8BXF8 369 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Q8C5S3 137 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Polr2hQ923G2 150 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Cela3bQ9CQ52 269 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 SdhbQ9CQA3 282 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Tex101Q9JMI7 250 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Heatr5aQ5PRF0 2038 aa13.09□□□□□ -0.31
Ushbp1-201ENSMUST00000049184 Gm12666A2AMD0 254 aaKnown RBP13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Gm14403A2BFU4 402 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Gprin2D3Z1D7 455 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Wdfy1E9Q4P1 410 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Ca6P18761 317 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 DaoP18894 345 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Uba1yP31254 1058 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Olfr13P34984 310 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Slc25a4P48962 298 aaKnown RBP13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Rab1AP62821 205 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Rps10P63325 165 aaKnown RBP13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Olfr125Q14AJ9 320 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 DhpsQ3TXU5 369 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Gm826Q3UQ74 109 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Olfr145Q60882 310 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Wdr92Q8BGF3 357 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Kremen2Q8K1S7 461 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Plekha3Q9ERS4 297 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Gng13Q9JMF3 67 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Olfr155Q9QZ22 319 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 StrapQ9Z1Z2 350 aaKnown RBP13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Spink14B9EJP9 96 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Zfp764E9QAP1 431 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Olfr199F6ZUS0 308 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Gm6526G3X9Q9 198 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Gm20939L7N243 523 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 S1pr1O08530 382 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Igk-V19-17P01633 149 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Znf271P15620 580 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Cdx1P18111 268 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Atp4bP50992 294 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Rps23P62267 143 aaKnown RBP13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Rap1aP62835 184 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Zfp772Q3UQL6 416 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Tmem171Q4KL18 322 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Lrrc52Q5M8M9 314 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Map3k3Q61084 626 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Zic4Q61467 341 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Olfr714Q7TRN0 317 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Q8C3I9 435 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Vmn1r231Q8R2A3 311 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Olfr1260Q8VGN9 310 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Vmn1r43Q8VIC9 329 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Mgat2Q921V5 442 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 MpiQ924M7 423 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 DohhQ99LN9 302 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Nsa2Q9CR47 260 aaKnown RBP13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Tceal8Q9CZY2 117 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Dtd1Q9DD18 209 aaKnown RBP13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Stard5Q9EPQ7 213 aa13.08□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Crybg1A0A0G2JG52 2065 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Gm13547A2ARC0 163 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Macc1E9PXX8 851 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Olfr554E9Q546 317 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Gm10665K7N6B7 321 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 C1ql1O88992 258 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Rab4aP56371 218 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Dnase2P56542 353 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Olfr18Q0VAX9 331 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 N4bp2l1Q3V2Q8 238 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Olfr3Q60879 313 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Commd3Q63829 195 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 CblcQ80XL1 496 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Adprhl1Q8BGK2 353 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Arl14epQ8BIX3 276 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Hs3st3a1Q8BKN6 393 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Pofut1Q91ZW2 393 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Rap1bQ99JI6 184 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Ccdc198Q9CPZ1 294 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Mllt1Q9ERL0 547 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Ypel1Q9ESC7 118 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Rcl1Q9JJT0 373 aaKnown RBP13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Dock8Q8C147 2100 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Gm498D3YYH9 372 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Enpp7D3Z6V6 446 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 1700017D01RikG5E851 209 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Olfr905L7N1X5 310 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Sod2P09671 222 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 LalbaP29752 143 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Hsd17b8P50171 259 aaKnown RBP13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Tmem69Q3KQJ0 245 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Gal3st2cQ3ULK5 396 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Faap20Q3UN58 186 aa13.07□□□□□ -0.32
Ushbp1-201ENSMUST00000049184 Slc22a27Q76M72 551 aa13.07□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 42 ms