RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Rep15Q9D7T1 230 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Skp2Q9Z0Z3 424 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Klk1b5P15945 261 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 RbpjP31266 526 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 F7P70375 446 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Npas1P97459 594 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Col19a1Q0VF58 1136 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Slc16a11Q5NC32 447 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Usf1Q61069 310 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Fzd8Q61091 685 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Gp49aQ61450 303 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Slco1b2Q9JJL3 689 aa20.88■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Olfr1229Q7TQZ9 311 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Crlf2Q8CII9 359 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Commd5Q8R395 224 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Isg20Q9JL16 300 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Olfr544E9PX47 334 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Gm6665F6Y363 85 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Olfr203L7N205 307 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Obox7Q4KL20 218 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 C130079G13RikQ8BUY2 280 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Rpp14Q9CQH8 122 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Spsb1Q9D5L7 273 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Lypd6bQ9D7F2 191 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Tmem25Q9DCF1 365 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Mettl23A2AA28 253 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Zfp971A2BFG8 470 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 9330182O14RikJ3QNB2 140 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Nipsnap2O55126 281 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Slc6a1P31648 599 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Oprm1P42866 398 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Zfp970Q08BU3 522 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Bloc1s3Q5U5M8 195 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Tob1Q61471 362 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Nhp2Q9CRB2 153 aaKnown RBP20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Zfp352A2AML7 551 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Sirt6P59941 334 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 ErgP81270 486 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Q8C784 167 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 6030452D12RikQ8CD33 222 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 SdhaQ8K2B3 664 aaKnown RBP20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Hus1bQ8K572 276 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Olfr678Q8VG26 313 aa20.87■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Tmem235B1AQL3 211 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Vmn1r113G3UWI8 307 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 1700009N14RikQ14AA6 216 aaKnown RBP20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Il11ra1Q64385 432 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 G6pc3Q6NSQ9 346 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Reps2Q80XA6 521 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Atpaf1Q811I0 324 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Q8C3M9 231 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Glipr2Q9CYL5 154 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Riox1Q9JJF3 603 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Mapk7Q9WVS8 806 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Ighv6-6A0A075B5T3 119 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 4930426L09RikE9Q0N7 123 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Slc6a12P31651 614 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Crybb2P62696 205 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Tbx6P70327 436 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Olfr1042Q7TR81 313 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Olfr497Q8VG08 314 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Wdr77Q99J09 342 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Clec1bQ9JL99 229 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Scml2B1AVB3 969 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Zfp493E9Q1L8 384 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Rplp1P47955 114 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Dus4lQ32M08 324 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Lin28aQ8K3Y3 209 aaKnown RBP20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Olfr995Q8VF74 315 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Cxcr6Q9EQ16 351 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Scn3aA2ASI5 1947 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Gm13723A0A1L1SUP2 315 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Gm6880A3KG45 208 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Cited1P97769 203 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Nkpd1Q0VF94 599 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Olfr1281Q7TQY6 305 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Znf784Q8BI69 297 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Olfr1495Q8VEZ4 319 aa20.86■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Lgals1P16045 135 aaKnown RBP20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Hmga1P17095 107 aaKnown RBP20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Gabrg2P22723 474 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Hist1h1bP43276 223 aaKnown RBP20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Cnrip1Q5M8N0 164 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Trav8d-2Q5R1B6 112 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Dcaf12Q8BGZ3 453 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 GrinaQ9ESF4 345 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Zfp831A2ADM8 1628 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Lemd1Q14C37 129 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Lrp12Q8BUJ9 858 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Chac2Q9CQG1 178 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Itln1O88310 313 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Wnt3P17553 355 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Egfbp2P36368 261 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Olfr1289A0A288CFY5 326 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 S1pr2P52592 352 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 A4gntQ14BT6 341 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Pafah1b3Q61205 232 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Csnk1g2Q8BVP5 415 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Olfr157Q9QZ20 318 aa20.85■□□□□ 0.93
Sh3rf1-201ENSMUST00000034060 Gm17657E9PWY5 170 aa20.84■□□□□ 0.93
Retrieved 100 of 22,080 RNA–protein pairs in 31.3 ms